Detailed information of g35276.t1.1 in Montipora cactus

Genomic Location: not available for this species
NR annotation: PFX31511.1, Pre-rRNA-processing protein esf2 [Stylophora pistillata]
Species abbreviation MCACT · all data for this species · gene families

 Sequence
No sequence record for g35276.t1.1 in MCACT (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O74362Pre-rRNA-processing protein esf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=esf2 PE=1 SV=1
Q0UM32Pre-rRNA-processing protein ESF2 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=ESF2 PE=3 SV=1
Q4KLM5Activator of basal transcription 1 OS=Rattus norvegicus OX=10116 GN=Abt1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006050 (this species only)

 Pfam domain
No Pfam domain signature was detected for g35276.t1.1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR035979
all species →		Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR039119
all species →		FamilyABT1/Esf2Interproscan
IPR034353
all species →		DomainABT1/ESF2, RNA recognition motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12311
all species →		ACTIVATOR OF BASAL TRANSCRIPTION 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0000447
all species →		Biological Processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000472
all species →		Biological Processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000480
all species →		Biological Processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0034462
all species →		Biological Processsmall-subunit processome assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g35276.t1.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP