Gene detail

Detailed information of g354.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_028407148.1, NADH-cytochrome b5 reductase 3-like [Dendronephthya gigantea]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UHQ9	NADH-cytochrome b5 reductase 1 OS=Homo sapiens OX=9606 GN=CYB5R1 PE=1 SV=1
Q9DB73	NADH-cytochrome b5 reductase 1 OS=Mus musculus OX=10090 GN=Cyb5r1 PE=1 SV=1
P20070	NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000002 (this species only)
Orthogroup (gene family)	OG0000079 (this species only)
Orthogroup (gene family)	OG0000201 (this species only)
Orthogroup (gene family)	OG0000376 (this species only)
Orthogroup (gene family)	OG0000873 (this species only)
Orthogroup (gene family)	OG0001024 (this species only)
Orthogroup (gene family)	OG0005269 (this species only)
Orthogroup (gene family)	OG0005630 (this species only)
Orthogroup (gene family)	OG0005694 (this species only)
Orthogroup (gene family)	OG0010941 (this species only)
Orthogroup (gene family)	OG0018998 (this species only)
Orthogroup (gene family)	OG0032559 (this species only)
Orthogroup (gene family)	OG0059772 (this species only)
Orthogroup (gene family)	OG0080311 (this species only)
Orthogroup (gene family)	OG0171127 (this species only)
Ubiquitin family	E3\|E3 activity RING\|RING · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00175 all species →	NAD_binding_1	Oxidoreductase NAD-binding domain	Domain	Interproscan
PF00970 all species →	FAD_binding_6	Oxidoreductase FAD-binding domain	Domain	Interproscan
PF17755 all species →	UvrA_DNA-bind	UvrA DNA-binding domain	Domain	Interproscan
PF17760 all species →	UvrA_inter	UvrA interaction domain	Domain	Interproscan
PF01433 all species →	Peptidase_M1	Peptidase family M1 domain	Domain	Interproscan
PF17900 all species →	Peptidase_M1_N	Peptidase M1 N-terminal domain	Domain	Interproscan
PF11838 all species →	ERAP1_C	ERAP1-like C-terminal domain	Domain	Interproscan
PF13923 all species →	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan
PF12874 all species →	zf-met	Zinc-finger of C2H2 type	Domain	Interproscan
PF08742 all species →	C8	C8 domain	Domain	Interproscan
PF00094 all species →	VWD	von Willebrand factor type D domain	Domain	Interproscan
PF01826 all species →	TIL	Trypsin Inhibitor like cysteine rich domain	Domain	Interproscan
PF00217 all species →	ATP-gua_Ptrans	ATP:guanido phosphotransferase, C-terminal catalytic domain	Domain	Interproscan
PF00188 all species →	CAP	Cysteine-rich secretory protein family	Domain	Interproscan
PF02771 all species →	Acyl-CoA_dh_N	Acyl-CoA dehydrogenase, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039261 all species →	Homologous_superfamily	Ferredoxin-NADP reductase (FNR), nucleotide-binding domain	Interproscan
IPR001834 all species →	Family	NADH:cytochrome b5 reductase-like	Interproscan
IPR017938 all species →	Homologous_superfamily	Riboflavin synthase-like beta-barrel	Interproscan
IPR001433 all species →	Domain	Oxidoreductase FAD/NAD(P)-binding	Interproscan
IPR001709 all species →	Domain	Flavoprotein pyridine nucleotide cytochrome reductase	Interproscan
IPR017927 all species →	Domain	FAD-binding domain, ferredoxin reductase-type	Interproscan
IPR008333 all species →	Domain	Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR041552 all species →	Domain	UvrA DNA-binding domain	Interproscan
IPR041102 all species →	Domain	UvrA, interaction domain	Interproscan
IPR017871 all species →	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR004602 all species →	Family	UvrABC system subunit A	Interproscan
IPR013815 all species →	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR042097 all species →	Homologous_superfamily	Aminopeptidase N-like , N-terminal domain superfamliy	Interproscan
IPR034016 all species →	Family	Aminopeptidase N-type	Interproscan
IPR050344 all species →	Family	Peptidase M1 family aminopeptidases	Interproscan
IPR001930 all species →	Family	Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase	Interproscan
IPR014782 all species →	Domain	Peptidase M1, membrane alanine aminopeptidase	Interproscan
IPR045357 all species →	Domain	Aminopeptidase N-like , N-terminal domain	Interproscan
IPR024571 all species →	Domain	ERAP1-like C-terminal domain	Interproscan
IPR027268 all species →	Homologous_superfamily	Peptidase M4/M1, CTD superfamily	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR017907 all species →	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR043197 all species →	Family	Plakin	Interproscan
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR003604 all species →	Domain	Matrin/U1-C-like, C2H2-type zinc finger	Interproscan
IPR000690 all species →	Domain	Matrin/U1-C, C2H2-type zinc finger	Interproscan
IPR052092 all species →	Family	Splicing Factor 3A Subunit 2	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR001846 all species →	Domain	von Willebrand factor, type D domain	Interproscan
IPR050780 all species →	Family	Mucin/von Willebrand/Thrombospondin superfamily	Interproscan
IPR036084 all species →	Homologous_superfamily	Serine protease inhibitor-like superfamily	Interproscan
IPR014853 all species →	Domain	VWF/SSPO/Zonadhesin-like, cysteine-rich domain	Interproscan
IPR002919 all species →	Domain	Trypsin Inhibitor-like, cysteine rich domain	Interproscan
IPR014746 all species →	Homologous_superfamily	Glutamine synthetase/guanido kinase, catalytic domain	Interproscan
IPR022414 all species →	Domain	ATP:guanido phosphotransferase, catalytic domain	Interproscan
IPR022415 all species →	Active_site	ATP:guanido phosphotransferase active site	Interproscan
IPR000749 all species →	Family	ATP:guanido phosphotransferase	Interproscan
IPR014044 all species →	Domain	CAP domain	Interproscan
IPR035940 all species →	Homologous_superfamily	CAP superfamily	Interproscan
IPR001283 all species →	Family	Cysteine-rich secretory protein-related	Interproscan
IPR013786 all species →	Domain	Acyl-CoA dehydrogenase/oxidase, N-terminal	Interproscan
IPR037069 all species →	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily	Interproscan
IPR009100 all species →	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19370 all species →	NADH-CYTOCHROME B5 REDUCTASE	Interproscan
PTHR43152 all species →	UVRABC SYSTEM PROTEIN A	Interproscan
PTHR37984 all species →	PROTEIN CBG26694	Interproscan
PTHR11533 all species →	PROTEASE M1 ZINC METALLOPROTEASE	Interproscan
PTHR23169 all species →	ENVOPLAKIN	Interproscan
PTHR23205 all species →	SPLICING FACTOR 3A SUBUNIT 2	Interproscan
PTHR11339 all species →	EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED	Interproscan
PTHR11547 all species →	ARGININE OR CREATINE KINASE	Interproscan
PTHR10334 all species →	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	Interproscan
PTHR43884 all species →	ACYL-COA DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0006289 all species →	Biological Process	nucleotide-excision repair	Interproscan
GO:0009380 all species →	Cellular Component	excinuclease repair complex	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0042277 all species →	Molecular Function	peptide binding	Interproscan
GO:0043171 all species →	Biological Process	peptide catabolic process	Interproscan
GO:0070006 all species →	Molecular Function	metalloaminopeptidase activity	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan
GO:0005198 all species →	Molecular Function	structural molecule activity	Interproscan
GO:0005882 all species →	Cellular Component	intermediate filament	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0042060 all species →	Biological Process	wound healing	Interproscan
GO:0045104 all species →	Biological Process	intermediate filament cytoskeleton organization	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0000245 all species →	Biological Process	spliceosomal complex assembly	Interproscan
GO:0005686 all species →	Cellular Component	U2 snRNP	Interproscan
GO:0071004 all species →	Cellular Component	U2-type prespliceosome	Interproscan
GO:0071013 all species →	Cellular Component	catalytic step 2 spliceosome	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0031012 all species →	Cellular Component	extracellular matrix	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan
GO:0016772 all species →	Molecular Function	transferase activity, transferring phosphorus-containing groups	Interproscan
GO:0004111 all species →	Molecular Function	creatine kinase activity	Interproscan
GO:0046314 all species →	Biological Process	phosphocreatine biosynthetic process	Interproscan
GO:0016627 all species →	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0003995 all species →	Molecular Function	acyl-CoA dehydrogenase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00326	CYB5R; cytochrome-b5 reductase	EC:1.6.2.2	Amino sugar and nucleotide sugar metabolism	ko00520	deepkoala
K00933	E2.7.3.2; creatine kinase	EC:2.7.3.2	Exosome	ko04147	deepkoala
K03701	uvrA; excinuclease ABC subunit A	-	DNA repair and recombination proteins	ko03400	deepkoala
K08776	NPEPPS; puromycin-sensitive aminopeptidase	EC:3.4.11.14	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.