Detailed information of g354.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_028407148.1, NADH-cytochrome b5 reductase 3-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9UHQ9NADH-cytochrome b5 reductase 1 OS=Homo sapiens OX=9606 GN=CYB5R1 PE=1 SV=1
Q9DB73NADH-cytochrome b5 reductase 1 OS=Mus musculus OX=10090 GN=Cyb5r1 PE=1 SV=1
P20070NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00175NAD_binding_1Oxidoreductase NAD-binding domain DomainInterproscan
PF00970FAD_binding_6Oxidoreductase FAD-binding domainDomainInterproscan
PF17755UvrA_DNA-bindUvrA DNA-binding domainDomainInterproscan
PF17760UvrA_interUvrA interaction domainDomainInterproscan
PF01433Peptidase_M1Peptidase family M1 domainDomainInterproscan
PF17900Peptidase_M1_NPeptidase M1 N-terminal domainDomainInterproscan
PF11838ERAP1_CERAP1-like C-terminal domainDomainInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF12874zf-metZinc-finger of C2H2 typeDomainInterproscan
PF08742C8C8 domainDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF01826TILTrypsin Inhibitor like cysteine rich domainDomainInterproscan
PF00217ATP-gua_PtransATP:guanido phosphotransferase, C-terminal catalytic domainDomainInterproscan
PF00188CAPCysteine-rich secretory protein familyDomainInterproscan
PF02771Acyl-CoA_dh_NAcyl-CoA dehydrogenase, N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039261Homologous_superfamilyFerredoxin-NADP reductase (FNR), nucleotide-binding domainInterproscan
IPR001834FamilyNADH:cytochrome b5 reductase-likeInterproscan
IPR017938Homologous_superfamilyRiboflavin synthase-like beta-barrelInterproscan
IPR001433DomainOxidoreductase FAD/NAD(P)-bindingInterproscan
IPR001709DomainFlavoprotein pyridine nucleotide cytochrome reductaseInterproscan
IPR017927DomainFAD-binding domain, ferredoxin reductase-typeInterproscan
IPR008333DomainFlavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR041552DomainUvrA DNA-binding domainInterproscan
IPR041102DomainUvrA, interaction domainInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR004602FamilyUvrABC system subunit AInterproscan
IPR013815Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR042097Homologous_superfamilyAminopeptidase N-like , N-terminal domain superfamliyInterproscan
IPR034016FamilyAminopeptidase N-typeInterproscan
IPR050344FamilyPeptidase M1 family aminopeptidasesInterproscan
IPR001930FamilyPeptidase M1, alanine aminopeptidase/leukotriene A4 hydrolaseInterproscan
IPR014782DomainPeptidase M1, membrane alanine aminopeptidaseInterproscan
IPR045357DomainAminopeptidase N-like , N-terminal domainInterproscan
IPR024571DomainERAP1-like C-terminal domainInterproscan
IPR027268Homologous_superfamilyPeptidase M4/M1, CTD superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR043197FamilyPlakinInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan
IPR000690DomainMatrin/U1-C, C2H2-type zinc fingerInterproscan
IPR052092FamilySplicing Factor 3A Subunit 2Interproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR050780FamilyMucin/von Willebrand/Thrombospondin superfamilyInterproscan
IPR036084Homologous_superfamilySerine protease inhibitor-like superfamilyInterproscan
IPR014853DomainVWF/SSPO/Zonadhesin-like, cysteine-rich domainInterproscan
IPR002919DomainTrypsin Inhibitor-like, cysteine rich domainInterproscan
IPR014746Homologous_superfamilyGlutamine synthetase/guanido kinase, catalytic domainInterproscan
IPR022414DomainATP:guanido phosphotransferase, catalytic domainInterproscan
IPR022415Active_siteATP:guanido phosphotransferase active siteInterproscan
IPR000749FamilyATP:guanido phosphotransferaseInterproscan
IPR014044DomainCAP domainInterproscan
IPR035940Homologous_superfamilyCAP superfamilyInterproscan
IPR001283FamilyCysteine-rich secretory protein-relatedInterproscan
IPR013786DomainAcyl-CoA dehydrogenase/oxidase, N-terminalInterproscan
IPR037069Homologous_superfamilyAcyl-CoA dehydrogenase/oxidase, N-terminal domain superfamilyInterproscan
IPR009100Homologous_superfamilyAcyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19370NADH-CYTOCHROME B5 REDUCTASEInterproscan
PTHR43152UVRABC SYSTEM PROTEIN AInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR11533PROTEASE M1 ZINC METALLOPROTEASEInterproscan
PTHR23169ENVOPLAKINInterproscan
PTHR23205SPLICING FACTOR 3A SUBUNIT 2Interproscan
PTHR11339EXTRACELLULAR MATRIX GLYCOPROTEIN RELATEDInterproscan
PTHR11547ARGININE OR CREATINE KINASEInterproscan
PTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDInterproscan
PTHR43884ACYL-COA DEHYDROGENASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0009380Cellular Componentexcinuclease repair complexInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0042277Molecular Functionpeptide bindingInterproscan
GO:0043171Biological Processpeptide catabolic processInterproscan
GO:0070006Molecular Functionmetalloaminopeptidase activityInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0005198Molecular Functionstructural molecule activityInterproscan
GO:0005882Cellular Componentintermediate filamentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0042060Biological Processwound healingInterproscan
GO:0045104Biological Processintermediate filament cytoskeleton organizationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0000245Biological Processspliceosomal complex assemblyInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0071004Cellular ComponentU2-type prespliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0016301Molecular Functionkinase activityInterproscan
GO:0016772Molecular Functiontransferase activity, transferring phosphorus-containing groupsInterproscan
GO:0004111Molecular Functioncreatine kinase activityInterproscan
GO:0046314Biological Processphosphocreatine biosynthetic processInterproscan
GO:0016627Molecular Functionoxidoreductase activity, acting on the CH-CH group of donorsInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0003995Molecular Functionacyl-CoA dehydrogenase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03701uvrA; excinuclease ABC subunit A-Amino sugar and nucleotide sugar metabolismko00520deepkoala
Peptidases and inhibitorsko01002deepkoala
Exosomeko04147deepkoala
DNA repair and recombination proteinsko03400deepkoala

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