Detailed information of g35457.t1 in Montipora capitata

Genomic Location: xpSc0028546:364...12451
NR annotation: CAH3149730.1, unnamed protein product [Porites lobata]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for g35457.t1 in MCAPI (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8JHJ2ATP-dependent RNA helicase DDX55 OS=Danio rerio OX=7955 GN=ddx55 PE=2 SV=2
Q6ZPL9ATP-dependent RNA helicase DDX55 OS=Mus musculus OX=10090 GN=Ddx55 PE=1 SV=2
Q6AZV7ATP-dependent RNA helicase DDX55 OS=Xenopus laevis OX=8355 GN=ddx55 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003987 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271
all species →		Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF13959
all species →		DUF4217Domain of unknown function (DUF4217)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR025313
all species →		DomainDomain of unknown function DUF4217Interproscan
IPR001650
all species →		DomainHelicase, C-terminal domain-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24031
all species →		RNA HELICASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14809DDX55, SPB4; ATP-dependent RNA helicase DDX55/SPB4EC:5.6.2.7
Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP