Detailed information of g35576.t1 in Montipora capitata

Genomic Location: xpSc0028578:15006...23368
NR annotation: XP_015777019.1, PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform X1 [Acropora digitifera]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for g35576.t1 in MCAPI (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P51992Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis OX=8355 PE=2 SV=1
O43347RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=9606 GN=MSI1 PE=1 SV=1
P21522Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americana OX=7009 GN=HNRNP PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000504 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →
RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504
all species →
DomainRNA recognition motif domainInterproscan
IPR012677
all species →
Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979
all species →
Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48032
all species →
RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003729
all species →
Molecular FunctionmRNA bindingInterproscan
GO:0006417
all species →
Biological Processregulation of translationInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g35576.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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