Detailed information of g35937.t1 in Montipora capitata

Genomic Location: xpSc0028762:6188...8191
NR annotation: CAH3020165.1, unnamed protein product [Porites evermanni]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for g35937.t1 in MCAPI (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000545 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21056
all species →
ZSWIM1-3_RNaseH-likeZinc finger SWIM domain-containing protein 1/3, RNaseH-like domainDomainInterproscan
PF00628
all species →
PHDPHD-fingerDomainInterproscan
PF20784
all species →
DUF5575_CDUF5575 C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048324
all species →
DomainZSWIM1/3, RNaseH-like domainInterproscan
IPR019787
all species →
DomainZinc finger, PHD-fingerInterproscan
IPR011011
all species →
Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR052579
all species →
FamilyZinc finger SWIM domain-containing proteinInterproscan
IPR049218
all species →
DomainDUF5575, C-terminal domainInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001965
all species →
DomainZinc finger, PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31569
all species →
SWIM-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for g35937.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g35937.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP