Detailed information of g35989.t1 in Montipora capitata

Genomic Location: xpSc0028818:3319...11853
NR annotation: CAH3187248.1, unnamed protein product, partial [Porites evermanni]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for g35989.t1 in MCAPI (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8C5N3Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus OX=10090 GN=Cwc22 PE=1 SV=1
Q9HCG8Pre-mRNA-splicing factor CWC22 homolog OS=Homo sapiens OX=9606 GN=CWC22 PE=1 SV=3
Q5RA93Pre-mRNA-splicing factor CWC22 homolog OS=Pongo abelii OX=9601 GN=CWC22 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002984 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02847
all species →
MA3MA3 domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003891
all species →
DomainInitiation factor eIF-4 gamma, MA3Interproscan
IPR050781
all species →
FamilyPre-mRNA-splicing factor CWC22Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18034
all species →
CELL CYCLE CONTROL PROTEIN CWF22-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →
Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0071013
all species →
Cellular Componentcatalytic step 2 spliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g35989.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP