Detailed information of g360.t2 in Acropora digitifera

Genomic Location: chr1Alt:5017635...5031274
NR annotation: CAH3172263.1, unnamed protein product [Porites lobata]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A2AJ76Hemicentin-2 OS=Mus musculus OX=10090 GN=Hmcn2 PE=1 SV=1
O60469Cell adhesion molecule DSCAM OS=Homo sapiens OX=9606 GN=DSCAM PE=1 SV=2
O35136Neural cell adhesion molecule 2 OS=Mus musculus OX=10090 GN=Ncam2 PE=1 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00047
all species →		igImmunoglobulin domainDomainInterproscan
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF00041
all species →		fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051170
all species →		FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR003961
all species →		DomainFibronectin type IIIInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR036116
all species →		Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013151
all species →		DomainImmunoglobulinInterproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12231
all species →		CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06491NCAM, CD56; neural cell adhesion molecule-Glycosylphosphatidylinositol (GPI)-anchored proteinsko00537deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP