Gene detail

Detailed information of g3607.t3.1 in Astreopora myriophthalma

Genomic Location: :...
NR annotation: XP_044172302.1, uncharacterized protein LOC114953813 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

g3607.t3

ATGGATCAGTTTAGTGTCGGATCCATCGTATGGGCTAGTGCTCGAGGAGACATTTTTTGGCCGGGTGAGGTGGTACAGTCAGGTAAGGAAGCTGTTGAAGAACCAGGAAATCACCTTACCAATGTCACAGTGAACTTTTTCATAGAGGATTCGTATGAAGACATCAAGaatgctaataaattattcccATGGAACTGTAATAAGCAACAAAAGTTTATTGGAAAAGGGCGAGCCCTGAAGAATGCAGAAAGAAAAGTTGACTTCAACAAGGCAGTGGCTAAAGCagataatttgttttccatGCaagagaagaaagaagacaGCTCTACTTCAAATGGGAAGGATTTGCCTATGAAATCACCACATGGAACAAgcaaaagaacgaaagaaaaactgaacaagAGTGAAAAGTCAGAAATACATGTGCTACGTAGGAGTCCAAGGACATTAATGATGAATGGTCATTCTCACAAAAGCTTAGCACCCAGTGCAGAGAACATAACAGAGAATCAGAGATTTAAAGTCACAAATAACTGTCCCTTATTGCAAGGCAATGGTGGACAAGTCATTTGCCTGCCAGGAGAATTGGATGTGgctgaaagaaacaacaatGGGAAAGTTTTAACAGAACATTGTCACACAGAAACACTATGCACAGTACAGAGTAAATGTGATGATTGTCAAAGGTGTGATGTCAAGCAGATGGGCTCTTCCGGAGATTATTCAAATGTGTCTGCTTCAGTAGGAAAAaagagaggaagaagaaaatcaCACCAAGTTTGTTTAAAAACTTCAACAGCTGCCCAGAGACAGTGTATGAATAGCAATGATTTGTCCGTccagtgtaataataataaaggtgTGTCCTCACAAACAAAATGTCCCACAAAAAGGAAGTTACTTGCCGAAGTTTCAAACAAGCAAAATGTGCCTTCAAAAAAGATGAAACGATGTGAACGGGATAGAGCAGAGAACCAGTCAAGACTAATTGTGGAAAGCAATCTAAGTTCCAATTTGATCAGTGAAAACATGTCCGAGACAAAGGAAGTGTGTGTAGGAGTGAATGGCCAAAGTATCGTTGGTGATCATCAAGTTACTGTGTGCGGGATTGACCCTCGTTGCCCTGATTCTGGAGGTAGTTCTGATGACGAGTTGTTTGTGGAATCATTTTCACCAAACCATCAAGAATCAAataAGTTTTCTGTTGGAGATATAGTGTGGGCAAAATACTATAGAGACCCTTACTGGCCAGCTGTGATCAAGAAGGTcactgaaaaaaagaaggaaaagaaattcCTTGTGCAATTTTTTTGCTGGGCTGATTGCTTGTTTAAGATACAGCCCAAGAAATTAGTTCATTTTGCTTGTGACGCAACACAGCGATCTGAATATAAGGGAGTGAAAATGATTAGCAAAGAACTTCAAGACATATTTGAAGAGGCCCTGATTGAAGCTGAGGACTTCATGAATAGGAAAGataAGTTTTCTGTTGGAGATATAGTGTGGGCAAAATACTATAGAGACCCTTACTGGCCAGCTGTGATCAAGAAGGTCACtgaaaaaaagagggaaaagaaaTTCCTTGTGCAATTTTTTTGCTGGGCTGATTGCTTGTTTAAGATACAGCCCAAGAAATTAGTTCATTTTGCTTGTGACGCAACACAGCGATCTGAATATAAGGGAGTGAAAATGATTAGCAAAGAACTTCAAGACATATTTGAAGAGGCCCTGATTGAAGCTGAGGACTTCATGAATAGGAAAGGTCTGGGAAAGAGTCTTGATGATGAAATAGATGAAGGAGATTTGCAGATTTTTGAGGAAAAAGATAACGaaagtgaaaattttgaaaaggaGACAGATGTCAACCAATTTGAAAGTCTTCCTCAATCATCCTCAAGAAGTCTGGTTGAATGCAGGAAATCGTTAAGGGAAAGAAAACGCGTGTCTAACTACAGCAACATTTTGTCTTACATCAGACAAGCAAAGCCAACTTTAAAGGGAATATTAAACGGAACTAAGGCATCGGAACGGCATACAATTTATACTAGCGGGAGAGTAAGCCAAAAGGACAACCTGAAGCGACGCTCAGGATTTGGCCCAATTGCAGACGAAAACCTGCGCGATGAAATAATGGACTTGCTCAAAGGTTTCTACAACGAACTACGAGGAACCACTGATATTACTTACGTCTCTGACGTGTGGCTTCCAGAGGCACTAATATGGTCCATAAGTCAGATGGACCACGTGGATCGGCAAACGGCGGAAAAGAAGTTTCGAGACGGCTTCGAATACGCCGTTAGCAACGAGGAAGTTCTTCAACTGACCACGAAACTTAAGCAGAGAAAACCGTCCGcggagaaaaaggaagaaagactGAGATCTGCTGAAAGGGCACTGACGAGACATCAGTTTCCCGTTAGCTGA

Transcript

g3607.t3

Protein

Uniprot

Uniprot term	Description
Q4VA55	PWWP domain-containing DNA repair factor 3B OS=Mus musculus OX=10090 GN=Pwwp3b PE=1 SV=2
B1H224	PWWP domain-containing DNA repair factor 3A OS=Rattus norvegicus OX=10116 GN=Pwwp3a PE=1 SV=1
Q6DID5	PWWP domain-containing DNA repair factor 3A OS=Mus musculus OX=10090 GN=Pwwp3a PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20886	PWP3A-B_C	PWWP domain-containing DNA repair factor 3A/B, C-terminal	Domain	Interproscan
PF00855	PWWP	PWWP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000313	Domain	PWWP domain	Interproscan
IPR040263	Family	PWWP domain-containing DNA repair factor 3A/3B/4	Interproscan
IPR035504	Domain	MUM1-like, PWWP domain	Interproscan
IPR048795	Domain	PWWP domain-containing DNA repair factor 3A/3B/4, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31333	PWWP DOMAIN-CONTAINING DNA REPAIR FACTOR 3 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23386	PWWP3, MUM1; PWWP domain-containing DNA repair factor 3	-	DNA repair and recombination proteins	ko03400	deepkoala