Detailed information of g361.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020891980.1, uncharacterized protein LOC110231309 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q64127Transcription intermediary factor 1-alpha OS=Mus musculus OX=10090 GN=Trim24 PE=1 SV=1
O15164Transcription intermediary factor 1-alpha OS=Homo sapiens OX=9606 GN=TRIM24 PE=1 SV=3
Q13263Transcription intermediary factor 1-beta OS=Homo sapiens OX=9606 GN=TRIM28 PE=1 SV=5
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF07699Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF02494HYRHYR domainDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF09379FERM_NFERM N-terminal domain DomainInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00373FERM_MFERM central domainDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF00439BromodomainBromodomainDomainInterproscan
PF04603Mog1Ran-interacting Mog1 proteinDomainInterproscan
PF10504DUF2452Protein of unknown function (DUF2452)FamilyInterproscan
PF01966HDHD domainFamilyInterproscan
PF00750tRNA-synt_1dtRNA synthetases class I (R)FamilyInterproscan
PF13286HD_assocPhosphohydrolase-associated domainDomainInterproscan
PF05746DALR_1DALR anticodon binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR026757FamilyEndosome-associated-trafficking regulator 1Interproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR011641DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR050751FamilyExtracellular matrix structural proteinInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR003410DomainHYR domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019749DomainBand 4.1 domainInterproscan
IPR018979DomainFERM, N-terminalInterproscan
IPR035963Homologous_superfamilyFERM superfamily, second domainInterproscan
IPR000299DomainFERM domainInterproscan
IPR014352Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR019748DomainFERM central domainInterproscan
IPR018980DomainFERM, C-terminal PH-like domainInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001487DomainBromodomainInterproscan
IPR003649DomainB-box, C-terminalInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR007681FamilyRan-interacting Mog1 proteinInterproscan
IPR016123Homologous_superfamilyMog1/PsbP, alpha/beta/alpha sandwichInterproscan
IPR019534FamilyProtein of unknown function DUF2452Interproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR006674DomainHD domainInterproscan
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR003607DomainHD/PDEase domainInterproscan
IPR001278FamilyArginine-tRNA ligaseInterproscan
IPR035684DomainArginyl-tRNA synthetase, catalytic core domainInterproscan
IPR008909DomainDALR anticodon bindingInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR026875DomainPhosphohydrolase-associated domainInterproscan
IPR006261FamilydNTP triphosphohydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34072ENZYMATIC POLYPROTEIN-RELATEDInterproscan
PTHR31259ENDOSOME-ASSOCIATED TRAFFICKING REGULATOR 1Interproscan
PTHR24034EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR232804.1 G PROTEINInterproscan
PTHR45915TRANSCRIPTION INTERMEDIARY FACTORInterproscan
PTHR47501TRANSPOSASE-RELATEDInterproscan
PTHR15837RAN GUANINE NUCLEOTIDE RELEASE FACTORInterproscan
PTHR14553UNCHARACTERIZED PROTEIN C1ORF50Interproscan
PTHR11956ARGINYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005769Cellular Componentearly endosomeInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0030496Cellular ComponentmidbodyInterproscan
GO:0032465Biological Processregulation of cytokinesisInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0045724Biological Processpositive regulation of cilium assemblyInterproscan
GO:0055037Cellular Componentrecycling endosomeInterproscan
GO:1903566Biological Processpositive regulation of protein localization to ciliumInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004814Molecular Functionarginine-tRNA ligase activityInterproscan
GO:0006420Biological Processarginyl-tRNA aminoacylationInterproscan
GO:0016793Molecular Functiontriphosphoric monoester hydrolase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08881TRIM24, TIF1A; tripartite motif-containing protein 24EC:2.3.2.27
Proteasomeko03051deepkoala
Ubiquitin systemko04121deepkoala

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