Detailed information of g366.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBT8411541.1, acyl-CoA/acyl-ACP dehydrogenase [Octadecabacter sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2LQN9Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase OS=Syntrophus aciditrophicus (strain SB) OX=56780 GN=SYNAS_02220 PE=1 SV=1
Q9UKU7Isobutyryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=ACAD8 PE=1 SV=1
A8XNF0Probable medium-chain specific acyl-CoA dehydrogenase 1, mitochondrial OS=Caenorhabditis briggsae OX=6238 GN=acdh-10 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02770Acyl-CoA_dh_MAcyl-CoA dehydrogenase, middle domainDomainInterproscan
PF02771Acyl-CoA_dh_NAcyl-CoA dehydrogenase, N-terminal domainDomainInterproscan
PF00441Acyl-CoA_dh_1Acyl-CoA dehydrogenase, C-terminal domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01336tRNA_anti-codonOB-fold nucleic acid binding domainDomainInterproscan
PF02938GADGAD domainDomainInterproscan
PF00152tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan
PF14465NFRKB_wingedNFRKB Winged Helix-likeDomainInterproscan
PF00687Ribosomal_L1Ribosomal protein L1p/L10e familyDomainInterproscan
PF13621Cupin_8Cupin-like domainDomainInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF00188CAPCysteine-rich secretory protein familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006091DomainAcyl-CoA oxidase/dehydrogenase, middle domainInterproscan
IPR036250Homologous_superfamilyAcyl-CoA dehydrogenase-like, C-terminalInterproscan
IPR013786DomainAcyl-CoA dehydrogenase/oxidase, N-terminalInterproscan
IPR009075DomainAcyl-CoA dehydrogenase/oxidase, C-terminalInterproscan
IPR009100Homologous_superfamilyAcyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamilyInterproscan
IPR037069Homologous_superfamilyAcyl-CoA dehydrogenase/oxidase, N-terminal domain superfamilyInterproscan
IPR046373Homologous_superfamilyAcyl-CoA oxidase/dehydrogenase, middle domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR004365DomainOB-fold nucleic acid binding domain, AA-tRNA synthetase-typeInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR047089DomainAspartate-tRNA ligase, type 1, anticodon recognition domainInterproscan
IPR029351DomainGAD domainInterproscan
IPR004524FamilyAspartate-tRNA ligase, type 1Interproscan
IPR002312FamilyAspartyl/Asparaginyl-tRNA synthetase, class IIbInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR004364DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan
IPR004115Homologous_superfamilyGAD-like domain superfamilyInterproscan
IPR047090DomainAspartate-tRNA ligase, type 1, core domainInterproscan
IPR025220DomainNFRKB winged helix-like domainInterproscan
IPR024867FamilyNuclear factor related to kappa-B-binding proteinInterproscan
IPR038106Homologous_superfamilyNFRKB winged helix-like domain superfamilyInterproscan
IPR016095Homologous_superfamilyLarge ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainInterproscan
IPR023673Conserved_siteLarge ribosomal subunit protein uL1, conserved siteInterproscan
IPR023674Homologous_superfamilyRibosomal protein uL1-likeInterproscan
IPR050257FamilyEukaryotic ribosomal RNA-processing and assembly proteinInterproscan
IPR028364FamilyRibosomal protein uL1/ribosomal biogenesis proteinInterproscan
IPR003347DomainJmjC domainInterproscan
IPR041667DomainCupin-like domain 8Interproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR014044DomainCAP domainInterproscan
IPR034113DomainGolgi-associated plant pathogenesis-related protein 1, SCP domainInterproscan
IPR035940Homologous_superfamilyCAP superfamilyInterproscan
IPR001283FamilyCysteine-rich secretory protein-relatedInterproscan
IPR018244Conserved_siteAllergen V5/Tpx-1-related, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43884ACYL-COA DEHYDROGENASEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR22594ASPARTYL/LYSYL-TRNA SYNTHETASEInterproscan
PTHR13052NFRKB-RELATEDInterproscan
PTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR12461HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATEDInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR23504MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10Interproscan
PTHR11537VOLTAGE-GATED POTASSIUM CHANNELInterproscan
PTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016627Molecular Functionoxidoreductase activity, acting on the CH-CH group of donorsInterproscan
GO:0003995Molecular Functionacyl-CoA dehydrogenase activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016874Molecular Functionligase activityInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004815Molecular Functionaspartate-tRNA ligase activityInterproscan
GO:0006422Biological Processaspartyl-tRNA aminoacylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0002020Molecular Functionprotease bindingInterproscan
GO:0031011Cellular ComponentIno80 complexInterproscan
GO:0000470Biological Processmaturation of LSU-rRNAInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0022625Cellular Componentcytosolic large ribosomal subunitInterproscan
GO:0016706Molecular Function2-oxoglutarate-dependent dioxygenase activityInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0005251Molecular Functiondelayed rectifier potassium channel activityInterproscan
GO:0008076Cellular Componentvoltage-gated potassium channel complexInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01876DARS2, aspS; aspartyl-tRNA synthetaseEC:6.1.1.12
Mitochondrial biogenesisko03029deepkoala

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