Detailed information of g367.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBW7861901.1, AMP-binding protein [Rhodocyclaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8VZF1Acetate/butyrate--CoA ligase AAE7, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=AAE7 PE=1 SV=1
M4IS88Acetate--CoA ligase CCL3 OS=Humulus lupulus OX=3486 GN=CCL3 PE=1 SV=1
F4HUK6Butanoate--CoA ligase AAE1 OS=Arabidopsis thaliana OX=3702 GN=AAE1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20700MutatorMutator-like transposaseDomainInterproscan
PF13193AMP-binding_CAMP-binding enzyme C-terminal domainDomainInterproscan
PF00501AMP-bindingAMP-binding enzymeFamilyInterproscan
PF00709Adenylsucc_syntAdenylosuccinate synthetaseDomainInterproscan
PF00121TIMTriosephosphate isomeraseDomainInterproscan
PF00188CAPCysteine-rich secretory protein familyDomainInterproscan
PF13621Cupin_8Cupin-like domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF00801PKDPKD domainDomainInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan
PF16878SIX1_SDTranscriptional regulator, SIX1, N-terminal SD domainDomainInterproscan
PF00071RasRas familyDomainInterproscan
PF00452Bcl-2Apoptosis regulator proteins, Bcl-2 familyFamilyInterproscan
PF00617RasGEFRasGEF domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049012DomainMutator-like transposase domainInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR045851Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan
IPR025110DomainAMP-binding enzyme, C-terminal domainInterproscan
IPR042099Homologous_superfamilyANL, N-terminal domainInterproscan
IPR020845Conserved_siteAMP-binding, conserved siteInterproscan
IPR000873DomainAMP-dependent synthetase/ligase domainInterproscan
IPR001114FamilyAdenylosuccinate synthetaseInterproscan
IPR000652FamilyTriosephosphate isomeraseInterproscan
IPR035990Homologous_superfamilyTriosephosphate isomerase superfamilyInterproscan
IPR042109Homologous_superfamilyAdenylosuccinate synthetase, domain 1Interproscan
IPR033128Active_siteAdenylosuccinate synthase, active siteInterproscan
IPR018220Binding_siteAdenylosuccinate synthase, GTP-binding siteInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR020861Active_siteTriosephosphate isomerase, active siteInterproscan
IPR042111Homologous_superfamilyAdenylosuccinate synthetase, domain 3Interproscan
IPR042110Homologous_superfamilyAdenylosuccinate synthetase, domain 2Interproscan
IPR014044DomainCAP domainInterproscan
IPR018244Conserved_siteAllergen V5/Tpx-1-related, conserved siteInterproscan
IPR034113DomainGolgi-associated plant pathogenesis-related protein 1, SCP domainInterproscan
IPR001283FamilyCysteine-rich secretory protein-relatedInterproscan
IPR035940Homologous_superfamilyCAP superfamilyInterproscan
IPR003347DomainJmjC domainInterproscan
IPR041667DomainCupin-like domain 8Interproscan
IPR000601DomainPKD domainInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR000483DomainCysteine-rich flanking region, C-terminalInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR014010DomainREJ domainInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR031701DomainHomeobox protein SIX1, N-terminal SD domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR020849FamilySmall GTPase, Ras-typeInterproscan
IPR046939Homologous_superfamilyTripeptidyl-peptidase 2, C-terminal domain superfamilyInterproscan
IPR026298FamilyBcl-2 familyInterproscan
IPR036834Homologous_superfamilyBcl-2-like superfamilyInterproscan
IPR046371DomainBcl-2, Bcl-2 homology region 1-3Interproscan
IPR002475FamilyBcl2-likeInterproscan
IPR020726Conserved_siteApoptosis regulator, Bcl-2, BH2 motif, conserved siteInterproscan
IPR001895DomainRas guanine-nucleotide exchange factors catalytic domainInterproscan
IPR036964Homologous_superfamilyRas guanine-nucleotide exchange factor, catalytic domain superfamilyInterproscan
IPR023578Homologous_superfamilyRas guanine nucleotide exchange factor domain superfamilyInterproscan
IPR008937FamilyRas-like guanine nucleotide exchange factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR43859ACYL-ACTIVATING ENZYMEInterproscan
PTHR11846ADENYLOSUCCINATE SYNTHETASEInterproscan
PTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDInterproscan
PTHR12461HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATEDInterproscan
PTHR46730POLYCYSTIN-1Interproscan
PTHR10390HOMEOBOX PROTEIN SIXInterproscan
PTHR24070RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILYInterproscan
PTHR11256BCL-2 RELATEDInterproscan
PTHR23113GUANINE NUCLEOTIDE EXCHANGE FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004019Molecular Functionadenylosuccinate synthase activityInterproscan
GO:0006164Biological Processpurine nucleotide biosynthetic processInterproscan
GO:0004807Molecular Functiontriose-phosphate isomerase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0044208Biological Process'de novo' AMP biosynthetic processInterproscan
GO:0046040Biological ProcessIMP metabolic processInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0016706Molecular Function2-oxoglutarate-dependent dioxygenase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0019003Molecular FunctionGDP bindingInterproscan
GO:0005741Cellular Componentmitochondrial outer membraneInterproscan
GO:0008630Biological Processintrinsic apoptotic signaling pathway in response to DNA damageInterproscan
GO:0042803Molecular Functionprotein homodimerization activityInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0097192Biological Processextrinsic apoptotic signaling pathway in absence of ligandInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0007265Biological ProcessRas protein signal transductionInterproscan
GO:0043547Biological Processpositive regulation of GTPase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20034dmdB; 3-(methylthio)propionyl---CoA ligaseEC:6.2.1.44
Sulfur metabolismko00920deepkoala

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