Detailed information of g3680.t1 in Montipora capitata

Genomic Location: Sc0000064:263220...277005
NR annotation: XP_015766182.1, PREDICTED: isoleucine--tRNA ligase, cytoplasmic-like [Acropora digitifera]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P41252Isoleucine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=IARS1 PE=1 SV=2
Q8BU30Isoleucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Iars1 PE=1 SV=2
Q21926Isoleucine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=iars-1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002633 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19302
all species →		DUF5915Domain of unknown function (DUF5915)DomainInterproscan
PF08264
all species →		Anticodon_1Anticodon-binding domain of tRNA ligaseDomainInterproscan
PF00133
all species →		tRNA-synt_1tRNA synthetases class I (I, L, M and V)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR023586
all species →		FamilyIsoleucine-tRNA ligase, type 2Interproscan
IPR009080
all species →		Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR013155
all species →		DomainMethionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingInterproscan
IPR033709
all species →		DomainIsoleucyl tRNA synthetase type 2, anticodon-binding domainInterproscan
IPR002300
all species →		DomainAminoacyl-tRNA synthetase, class IaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42780
all species →		SOLEUCYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004822
all species →		Molecular Functionisoleucine-tRNA ligase activityInterproscan
GO:0006428
all species →		Biological Processisoleucyl-tRNA aminoacylationInterproscan
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0000049
all species →		Molecular FunctiontRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g3680.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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