Detailed information of g369.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCR9135434.1, ABC transporter substrate-binding protein [Alphaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P42061Oligopeptide-binding protein AppA OS=Bacillus subtilis (strain 168) OX=224308 GN=appA PE=1 SV=2
Q642M9Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=Danio rerio OX=7955 GN=dhdh PE=2 SV=2
Q9TV69Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=Sus scrofa OX=9823 GN=DHDH PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21788TNP-like_GBDTNP-like, GTP-binding insertion domainDomainInterproscan
PF02776TPP_enzyme_NThiamine pyrophosphate enzyme, N-terminal TPP binding domainDomainInterproscan
PF02775TPP_enzyme_CThiamine pyrophosphate enzyme, C-terminal TPP binding domainDomainInterproscan
PF00205TPP_enzyme_MThiamine pyrophosphate enzyme, central domainDomainInterproscan
PF00285Citrate_syntCitrate synthase, C-terminal domainDomainInterproscan
PF00496SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 MiddleDomainInterproscan
PF00188CAPCysteine-rich secretory protein familyDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF01408GFO_IDH_MocAOxidoreductase family, NAD-binding Rossmann foldFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048366DomainTransposable element P transposase-like, GTP-binding insertion domainInterproscan
IPR029061Homologous_superfamilyThiamin diphosphate-binding foldInterproscan
IPR045025FamilyTPP-binding domain containing protein HACL1-likeInterproscan
IPR012001DomainThiamine pyrophosphate enzyme, N-terminal TPP-binding domainInterproscan
IPR011766DomainThiamine pyrophosphate enzyme, TPP-bindingInterproscan
IPR012000DomainThiamine pyrophosphate enzyme, central domainInterproscan
IPR029035Homologous_superfamilyDHS-like NAD/FAD-binding domain superfamilyInterproscan
IPR036969Homologous_superfamilyCitrate synthase superfamilyInterproscan
IPR002020FamilyCitrate synthaseInterproscan
IPR016142Homologous_superfamilyCitrate synthase-like, large alpha subdomainInterproscan
IPR019810Active_siteCitrate synthase active siteInterproscan
IPR039424FamilySolute-binding protein family 5Interproscan
IPR023765Conserved_siteSolute-binding protein family 5, conserved siteInterproscan
IPR030678FamilyPeptide/nickel binding protein, MppA-typeInterproscan
IPR000914DomainSolute-binding protein family 5 domainInterproscan
IPR035940Homologous_superfamilyCAP superfamilyInterproscan
IPR014044DomainCAP domainInterproscan
IPR001283FamilyCysteine-rich secretory protein-relatedInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR050984FamilyGfo/Idh/MocA domain-containing proteinInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR000683DomainGfo/Idh/MocA-like oxidoreductase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR437102-HYDROXYACYL-COA LYASEInterproscan
PTHR42871CITRATE SYNTHASEInterproscan
PTHR30290PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTERInterproscan
PTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR22604OXIDOREDUCTASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001561Biological Processfatty acid alpha-oxidationInterproscan
GO:0005777Cellular ComponentperoxisomeInterproscan
GO:0030976Molecular Functionthiamine pyrophosphate bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0046912Molecular Functionacyltransferase activity, acyl groups converted into alkyl on transferInterproscan
GO:0015833Biological Processpeptide transportInterproscan
GO:0030288Cellular Componentouter membrane-bounded periplasmic spaceInterproscan
GO:1904680Molecular Functionpeptide transmembrane transporter activityInterproscan
GO:0043190Cellular ComponentATP-binding cassette (ABC) transporter complexInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01647CS, gltA; citrate synthaseEC:2.3.3.1
Transportersko02000deepkoala
Enzymes with EC numbers-deepkoala
Metabolism of xenobiotics by cytochrome P450ko00980deepkoala
Glyoxylate and dicarboxylate metabolismko00630deepkoala

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