Detailed information of g3695.t2 in Acropora digitifera

Genomic Location: chr2Alt:16120411...16141650
NR annotation: XP_029182922.2, LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 16-like [Acropora millepora]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UKP5A disintegrin and metalloproteinase with thrombospondin motifs 6 OS=Homo sapiens OX=9606 GN=ADAMTS6 PE=1 SV=2
Q4VC17A disintegrin and metalloproteinase with thrombospondin motifs 18 OS=Mus musculus OX=10090 GN=Adamts18 PE=2 SV=2
Q8TE60A disintegrin and metalloproteinase with thrombospondin motifs 18 OS=Homo sapiens OX=9606 GN=ADAMTS18 PE=1 SV=3
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17771
all species →		ADAMTS_CR_2ADAMTS cysteine-rich domain 2DomainInterproscan
PF01421
all species →		ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan
PF19236
all species →		ADAMTS_CR_3ADAMTS cysteine-rich domainDomainInterproscan
PF19030
all species →		TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR041645
all species →		DomainADAMTS, cysteine-rich domain 2Interproscan
IPR001590
all species →		DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR024079
all species →		Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR045371
all species →		DomainADAMTS/ADAMTS-like, cysteine-rich domain 3Interproscan
IPR013273
all species →		FamilyADAMTS/ADAMTS-likeInterproscan
IPR006586
all species →		DomainADAM, cysteine-rich domainInterproscan
IPR050439
all species →		FamilyADAMTS and ADAMTS-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13723
all species →		ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004222
all species →		Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0008237
all species →		Molecular Functionmetallopeptidase activityInterproscan
GO:0030198
all species →		Biological Processextracellular matrix organizationInterproscan
GO:0031012
all species →		Cellular Componentextracellular matrixInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g3695.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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