Detailed information of g37.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_219775801.1, UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Polymorphobacter sp. PAMC 29334]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5FSM2UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=murA PE=3 SV=1
A5V4L0UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Rhizorhabdus wittichii (strain DSM 6014 / CCUG 31198 / JCM 15750 / NBRC 105917 / EY 4224 / RW1) OX=392499 GN=murA PE=3 SV=1
A9HFN0UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / CCUG 37298 / CIP 103539 / LMG 7603 / PAl5) OX=272568 GN=murA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)FamilyInterproscan
PF00852Glyco_transf_10Glycosyltransferase family 10 (fucosyltransferase) C-termFamilyInterproscan
PF17039Glyco_tran_10_NFucosyltransferase, N-terminalDomainInterproscan
PF02148zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF00996GDIGDP dissociation inhibitorFamilyInterproscan
PF21245PI4KB-PIK1_PIKPI4KB/PIK1, accessory (PIK) domainRepeatInterproscan
PF00929RNase_TExonucleaseFamilyInterproscan
PF01139RtcBtRNA-splicing ligase RtcBFamilyInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF10545MADF_DNA_bdgAlcohol dehydrogenase transcription factor Myb/SANT-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036968Homologous_superfamilyEnolpyruvate transferase domain superfamilyInterproscan
IPR001986DomainEnolpyruvate transferase domainInterproscan
IPR005750FamilyUDP-N-acetylglucosamine 1-carboxyvinyltransferaseInterproscan
IPR050068FamilyUDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA subfamilyInterproscan
IPR013792Homologous_superfamilyRNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/betaInterproscan
IPR001503FamilyGlycosyl transferase family 10Interproscan
IPR038577Homologous_superfamilyGT10-like, C-terminal domain superfamilyInterproscan
IPR031481DomainFucosyltransferase, N-terminalInterproscan
IPR001607DomainZinc finger, UBP-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR000806FamilyRab GDI proteinInterproscan
IPR018203FamilyGDP dissociation inhibitorInterproscan
IPR042236Homologous_superfamilyPhosphoinositide 3-kinase, accessory (PIK) domain superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR001263DomainPhosphoinositide 3-kinase, accessory (PIK) domainInterproscan
IPR049160DomainPI4KB/PIK1, accessory domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR013520DomainExonuclease, RNase T/DNA polymerase IIIInterproscan
IPR022894FamilyOligoribonucleaseInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001233FamilyRNA-splicing ligase, RtcBInterproscan
IPR036025Homologous_superfamilytRNA-splicing ligase RtcB-like superfamilyInterproscan
IPR027513FamilyRNA-splicing ligase RtcB homologue, eukaryoticInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR006578DomainMADF domainInterproscan
IPR004210DomainBESS motifInterproscan
IPR039353FamilyTranscription factor Adf-1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43783UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASEInterproscan
PTHR11929ALPHA- 1,3 -FUCOSYLTRANSFERASEInterproscan
PTHR11787RAB GDP-DISSOCIATION INHIBITORInterproscan
PTHR34239APPLE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11046OLIGORIBONUCLEASE, MITOCHONDRIALInterproscan
PTHR11118UNCHARACTERIZEDInterproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR12243MADF DOMAIN TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016765Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groupsInterproscan
GO:0008760Molecular FunctionUDP-N-acetylglucosamine 1-carboxyvinyltransferase activityInterproscan
GO:0019277Biological ProcessUDP-N-acetylgalactosamine biosynthetic processInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0008417Molecular Functionfucosyltransferase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0036065Biological ProcessfucosylationInterproscan
GO:0046920Molecular Functionalpha-(1->3)-fucosyltransferase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005093Molecular FunctionRab GDP-dissociation inhibitor activityInterproscan
GO:0015031Biological Processprotein transportInterproscan
GO:0005092Molecular FunctionGDP-dissociation inhibitor activityInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0008452Molecular FunctionRNA ligase activityInterproscan
GO:0000971Biological Processobsolete tRNA exon ligation utilizing 2',3' cyclic phosphate of 5'-exon as source of linkage phosphateInterproscan
GO:0003972Molecular FunctionRNA ligase (ATP) activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0072669Cellular ComponenttRNA-splicing ligase complexInterproscan
GO:0006388Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13288orn, REX2, REXO2; oligoribonucleaseEC:3.1.-.-
Peptidoglycan biosynthesis and degradation proteinsko01011deepkoala
Exosomeko04147deepkoala
Transfer RNA biogenesisko03016deepkoala
Ribosome biogenesisko03009deepkoala

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