Gene detail

Detailed information of g37.t1 in Tripedalia maipoensis

Genomic Location: scaffold_1:3115357...3125197
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04051 all species →	TRAPP	Transport protein particle (TRAPP) component	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007194 all species →	Family	Transport protein particle (TRAPP) component	Interproscan
IPR037992 all species →	Family	TRAPP complex, Trs33 subunit	Interproscan
IPR024096 all species →	Homologous_superfamily	NO signalling/Golgi transport ligand-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12817 all species →	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005801 all species →	Cellular Component	cis-Golgi network	Interproscan
GO:0005802 all species →	Cellular Component	trans-Golgi network	Interproscan
GO:0006888 all species →	Biological Process	endoplasmic reticulum to Golgi vesicle-mediated transport	Interproscan
GO:0030008 all species →	Cellular Component	TRAPP complex	Interproscan
GO:0043087 all species →	Biological Process	regulation of GTPase activity	Interproscan
GO:0048193 all species →	Biological Process	Golgi vesicle transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20304	TRAPPC6, TRS33; trafficking protein particle complex subunit 6	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.