Detailed information of g370.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_228365029.1, type I restriction-modification system subunit M [Legionella sp. 31fI33]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q47163Type I restriction enzyme EcoprrI methylase subunit OS=Escherichia coli OX=562 GN=hsdM PE=3 SV=1
P10484Type I restriction enzyme EcoR124I/EcoR124II methylase subunit OS=Escherichia coli OX=562 GN=hsdM PE=1 SV=1
P75436Type I restriction enzyme MpnII methylase subunit OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) OX=272634 GN=MPN_342 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00412LIMLIM domainDomainInterproscan
PF13193AMP-binding_CAMP-binding enzyme C-terminal domainDomainInterproscan
PF00501AMP-bindingAMP-binding enzymeFamilyInterproscan
PF16177ACAS_NAcetyl-coenzyme A synthetase N-terminusFamilyInterproscan
PF12161HsdM_NHsdM N-terminal domainDomainInterproscan
PF02384N6_MtaseN-6 DNA MethylaseFamilyInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR042099Homologous_superfamilyANL, N-terminal domainInterproscan
IPR025110DomainAMP-binding enzyme, C-terminal domainInterproscan
IPR011904FamilyAcetate-CoA ligaseInterproscan
IPR020845Conserved_siteAMP-binding, conserved siteInterproscan
IPR000873DomainAMP-dependent synthetase/ligase domainInterproscan
IPR045851Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan
IPR032387DomainAcetyl-coenzyme A synthetase, N-terminal domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR001875DomainDeath effector domainInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR002052Conserved_siteDNA methylase, N-6 adenine-specific, conserved siteInterproscan
IPR038333Homologous_superfamilyType I restriction enzyme EcoKI-like, methylase subunit, N-terminal domain superfamilyInterproscan
IPR051537FamilyDNA Adenine N(4)/N(6)-MethyltransferaseInterproscan
IPR004546FamilyRestriction endonuclease, type I, methylase subunitInterproscan
IPR022749DomainN6 adenine-specific DNA methyltransferase, N-terminal domainInterproscan
IPR003356DomainDNA methylase, adenine-specificInterproscan
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR026188FamilyLebercilin-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24205FOUR AND A HALF LIM DOMAINS PROTEINInterproscan
PTHR24095ACETYL-COENZYME A SYNTHETASEInterproscan
PTHR42933SLR6095 PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR16650C21ORF13-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0030018Cellular ComponentZ discInterproscan
GO:0003987Molecular Functionacetate-CoA ligase activityInterproscan
GO:0016208Molecular FunctionAMP bindingInterproscan
GO:0019427Biological Processacetyl-CoA biosynthetic process from acetateInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006085Biological Processacetyl-CoA biosynthetic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0032259Biological ProcessmethylationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0009007Molecular Functionsite-specific DNA-methyltransferase (adenine-specific) activityInterproscan
GO:0009307Biological ProcessDNA restriction-modification systemInterproscan
GO:0008170Molecular FunctionN-methyltransferase activityInterproscan
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0005930Cellular ComponentaxonemeInterproscan
GO:0042073Biological Processintraciliary transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01895ACSS1_2, acs; acetyl-CoA synthetaseEC:6.2.1.1
Prokaryotic defense systemko02048deepkoala
Lipid biosynthesis proteinsko01004deepkoala

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