Detailed information of g371.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KAF1080165.1, hypothetical protein GQF41_3632 [Candidatus Rifleibacterium amylolyticum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B9M3W3GTPase Obg OS=Geotalea daltonii (strain DSM 22248 / JCM 15807 / FRC-32) OX=316067 GN=obg PE=3 SV=1
C0QUB5GTPase Obg OS=Persephonella marina (strain DSM 14350 / EX-H1) OX=123214 GN=obg PE=3 SV=1
A5GD29GTPase Obg OS=Geotalea uraniireducens (strain Rf4) OX=351605 GN=obg PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17035BETBromodomain extra-terminal - transcription regulationDomainInterproscan
PF00439BromodomainBromodomainDomainInterproscan
PF00006ATP-synt_abATP synthase alpha/beta family, nucleotide-binding domainDomainInterproscan
PF02874ATP-synt_ab_NATP synthase alpha/beta family, beta-barrel domainDomainInterproscan
PF18269T3SS_ATPase_CT3SS EscN ATPase C-terminal domainDomainInterproscan
PF14378PAP2_3PAP2 superfamilyFamilyInterproscan
PF01335DEDDeath effector domainDomainInterproscan
PF01018GTP1_OBGGTP1/OBGDomainInterproscan
PF01926MMR_HSR150S ribosome-binding GTPaseFamilyInterproscan
PF04383KilA-NKilA-N domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF12444Sox_NSox developmental protein N terminal FamilyInterproscan
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001487DomainBromodomainInterproscan
IPR050935FamilyBromodomain-containing chromatin readerInterproscan
IPR027353DomainNET domainInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR038336Homologous_superfamilyNET domain superfamilyInterproscan
IPR020003Active_siteATPase, alpha/beta subunit, nucleotide-binding domain, active siteInterproscan
IPR005714FamilyATPase, type III secretion system, FliI/YscNInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR000194DomainATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainInterproscan
IPR050053FamilyATPase alpha/beta chainsInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR004100DomainATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainInterproscan
IPR040627DomainT3SS EscN ATPase, C-terminalInterproscan
IPR052185FamilyInositol Phosphorylceramide Synthase-RelatedInterproscan
IPR026841DomainInositolphosphotransferase Aur1/Ipt1Interproscan
IPR036938Homologous_superfamilyPhosphatidic acid phosphatase type 2/haloperoxidase superfamilyInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR001875DomainDeath effector domainInterproscan
IPR006169DomainGTP1/OBG domainInterproscan
IPR006073DomainGTP binding domainInterproscan
IPR014100FamilyGTP-binding protein Obg/CgtAInterproscan
IPR036726Homologous_superfamilyGTP1/OBG domain superfamilyInterproscan
IPR045086FamilyOBG-type GTPaseInterproscan
IPR031167DomainOBG-type guanine nucleotide-binding (G) domainInterproscan
IPR017880DomainKilA, N-terminalInterproscan
IPR018004DomainKilA/APSES-type HTH, DNA-bindingInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR050917FamilySOX Transcription FactorsInterproscan
IPR022151DomainSox developmental protein N-terminalInterproscan
IPR009071DomainHigh mobility group box domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINSInterproscan
PTHR15184ATP SYNTHASEInterproscan
PTHR31310-Interproscan
PTHR11702DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATEDInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR45803SOX100BInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0070577Molecular Functionlysine-acetylated histone bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0030254Biological Processprotein secretion by the type III secretion systemInterproscan
GO:0030257Cellular Componenttype III protein secretion system complexInterproscan
GO:0045261Cellular Componentproton-transporting ATP synthase complex, catalytic core F(1)Interproscan
GO:0046933Molecular Functionproton-transporting ATP synthase activity, rotational mechanismInterproscan
GO:0046034Biological ProcessATP metabolic processInterproscan
GO:1902600Biological Processproton transmembrane transportInterproscan
GO:0006673Biological Processinositol phosphoceramide metabolic processInterproscan
GO:0030148Biological Processsphingolipid biosynthetic processInterproscan
GO:0045140Molecular Functioninositol phosphoceramide synthase activityInterproscan
GO:0070916Cellular Componentinositol phosphoceramide synthase complexInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04614V1R; vomeronasal 1 receptor-Ribosome biogenesisko03009deepkoala
Bacterial motility proteinsko02035deepkoala
G protein-coupled receptorsko04030deepkoala

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