Gene detail

Detailed information of g3728.t1 in Tripedalia maipoensis

Genomic Location: scaffold_14:18432221...18439250
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006349 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01157 all species →	Ribosomal_L21e	Ribosomal protein L21e	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036948 all species →	Homologous_superfamily	Large ribosomal subunit protein eL21 superfamily	Interproscan
IPR001147 all species →	Family	Large ribosomal subunit protein eL21	Interproscan
IPR018259 all species →	Conserved_site	Large ribosomal subunit protein eL21, conserved site	Interproscan
IPR008991 all species →	Homologous_superfamily	Translation protein SH3-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20981 all species →	60S RIBOSOMAL PROTEIN L21	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02889	RP-L21e, RPL21; large subunit ribosomal protein L21e	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.