Detailed information of g376.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_196609673.1, restriction endonuclease subunit S [Escherichia coli]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P10485Type I restriction enzyme EcoR124I/EcoR124II specificity subunit OS=Escherichia coli OX=562 GN=hsdS PE=1 SV=2
P71344Putative type I restriction enzyme specificity subunit S.HindORF215P OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_0216 PE=3 SV=1
P17222Type I restriction enzyme EcoprrI specificity subunit OS=Escherichia coli OX=562 GN=prrB PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyTHAP
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00122E1-E2_ATPaseE1-E2 ATPaseFamilyInterproscan
PF00702Hydrolasehaloacid dehalogenase-like hydrolaseDomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF01346FKBP_NDomain amino terminal to FKBP-type peptidyl-prolyl isomeraseDomainInterproscan
PF00254FKBP_CFKBP-type peptidyl-prolyl cis-trans isomeraseDomainInterproscan
PF01420Methylase_SType I restriction modification DNA specificity domainDomainInterproscan
PF00107ADH_zinc_NZinc-binding dehydrogenaseDomainInterproscan
PF01652IF4EEukaryotic initiation factor 4EDomainInterproscan
PF08240ADH_NAlcohol dehydrogenase GroES-like domainDomainInterproscan
PF21787TNP-like_RNaseH_NTNP-like, RNase H N-terminal domainDomainInterproscan
PF21788TNP-like_GBDTNP-like, GTP-binding insertion domainDomainInterproscan
PF12017Tnp_P_elementTransposable element P transposase-like, HTH domainDomainInterproscan
PF21789TNP-like_RNaseH_CTNP-like, RNase H C-terminal domainDomainInterproscan
PF14608zf-CCCH_2RNA-binding, Nab2-type zinc fingerDomainInterproscan
PF03847TFIID_20kDaTranscription initiation factor TFIID subunit ADomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023298Homologous_superfamilyP-type ATPase, transmembrane domain superfamilyInterproscan
IPR023214Homologous_superfamilyHAD superfamilyInterproscan
IPR001757FamilyP-type ATPaseInterproscan
IPR036412Homologous_superfamilyHAD-like superfamilyInterproscan
IPR008250Homologous_superfamilyP-type ATPase, A domain superfamilyInterproscan
IPR023299Homologous_superfamilyP-type ATPase, cytoplasmic domain NInterproscan
IPR051014FamilyCation Transport ATPase Type IBInterproscan
IPR018303PTMP-type ATPase, phosphorylation siteInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR052224FamilyTHAP domain-containing proteinInterproscan
IPR038441Homologous_superfamilyTHAP-type zinc finger superfamilyInterproscan
IPR036944Homologous_superfamilyPeptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamilyInterproscan
IPR000774DomainPeptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminalInterproscan
IPR001179DomainFKBP-type peptidyl-prolyl cis-trans isomerase domainInterproscan
IPR046357Homologous_superfamilyPeptidyl-prolyl cis-trans isomerase domain superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR051212FamilyType I restriction enzyme S subunitInterproscan
IPR000055DomainType I restriction modification DNA specificity domainInterproscan
IPR044946Homologous_superfamilyType I restriction modification DNA specificity domain superfamilyInterproscan
IPR050129FamilyZinc-containing alcohol dehydrogenaseInterproscan
IPR013149DomainAlcohol dehydrogenase-like, C-terminalInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR023398Homologous_superfamilyTranslation Initiation factor eIF- 4e-likeInterproscan
IPR001040FamilyTranslation Initiation factor eIF- 4eInterproscan
IPR011032Homologous_superfamilyGroES-like superfamilyInterproscan
IPR002328Conserved_siteAlcohol dehydrogenase, zinc-type, conserved siteInterproscan
IPR013154DomainAlcohol dehydrogenase-like, N-terminalInterproscan
IPR048365DomainTransposable element P transposase-like, RNase H domain, N-terminalInterproscan
IPR048366DomainTransposable element P transposase-like, GTP-binding insertion domainInterproscan
IPR021896DomainTHAP9-like, helix-turn-helix domainInterproscan
IPR048367DomainTransposable element P transposase-like, RNase H, C-terminal domainInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR040366FamilyNuclear polyadenylated RNA-binding protein Nab2/ZC3H14Interproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR037794FamilyTranscription initiation factor TFIID subunit 12Interproscan
IPR003228DomainTranscription initiation factor TFIID subunit 12 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48085CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATEDInterproscan
PTHR46927AGAP005574-PAInterproscan
PTHR43811FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPAInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR43140TYPE-1 RESTRICTION ENZYME ECOKI SPECIFICITY PROTEINInterproscan
PTHR43401L-THREONINE 3-DEHYDROGENASEInterproscan
PTHR47577THAP DOMAIN-CONTAINING PROTEIN 6Interproscan
PTHR14738ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14Interproscan
PTHR12264TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005215Molecular Functiontransporter activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008143Molecular Functionpoly(A) bindingInterproscan
GO:0043488Biological Processregulation of mRNA stabilityInterproscan
GO:1900364Biological Processobsolete negative regulation of mRNA polyadenylationInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000124Cellular ComponentSAGA complexInterproscan
GO:0005669Cellular Componenttranscription factor TFIID complexInterproscan
GO:0017025Molecular FunctionTBP-class protein bindingInterproscan
GO:0051123Biological ProcessRNA polymerase II preinitiation complex assemblyInterproscan
GO:0006352Biological ProcessDNA-templated transcription initiationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23209THAP9; DNA transposase THAP9EC:2.7.7.-
Prokaryotic defense systemko02048deepkoala
Messenger RNA biogenesisko03019deepkoala
Chromosome and associated proteinsko03036deepkoala
Enzymes with EC numbers-deepkoala
Chromosome and associated proteinsko03036deepkoala

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