Detailed information of g377.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBT4080769.1, virulence RhuM family protein [Gammaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q28CZ9Cytochrome b5 reductase 4 OS=Xenopus tropicalis OX=8364 GN=cyb5r4 PE=2 SV=1
Q3TDX8Cytochrome b5 reductase 4 OS=Mus musculus OX=10090 GN=Cyb5r4 PE=2 SV=3
Q68EJ0Cytochrome b5 reductase 4 OS=Rattus norvegicus OX=10116 GN=Cyb5r4 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyDUB|ULP|ULP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00175NAD_binding_1Oxidoreductase NAD-binding domain DomainInterproscan
PF14214Helitron_like_NHelitron helicase-like domain at N-terminusFamilyInterproscan
PF05970PIF1PIF1-like helicaseFamilyInterproscan
PF04621ETS_PEA3_NPEA3 subfamily ETS-domain transcription factor N terminal domainFamilyInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF13310Virulence_RhuMVirulence protein RhuM familyFamilyInterproscan
PF13890Rab3-GTPase_catRab3 GTPase-activating protein catalytic subunitFamilyInterproscan
PF19533Rab3-GAP_cat_CRab3 GTPase-activating protein catalytic subunit C-terminalDomainInterproscan
PF02902Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan
PF20240DUF6597Domain of unknown function (DUF6597)DomainInterproscan
PF12833HTH_18Helix-turn-helix domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039261Homologous_superfamilyFerredoxin-NADP reductase (FNR), nucleotide-binding domainInterproscan
IPR001433DomainOxidoreductase FAD/NAD(P)-bindingInterproscan
IPR001834FamilyNADH:cytochrome b5 reductase-likeInterproscan
IPR025476DomainHelitron helicase-like domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR010285FamilyDNA helicase Pif1-likeInterproscan
IPR006715DomainPEA3-type ETS-domain transcription factor, N-terminalInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR011204FamilyVirulence protein RhuM-likeInterproscan
IPR045700FamilyRab3GAP catalytic subunitInterproscan
IPR026147DomainRab3GAP catalytic subunit, conserved domainInterproscan
IPR045698DomainRab3GAP catalytic subunit, C-terminalInterproscan
IPR003653DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR050204FamilyAraC/XylS family transcriptional regulatorsInterproscan
IPR018060DomainDNA binding HTH domain, AraC-typeInterproscan
IPR046532DomainDomain of unknown function DUF6597Interproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19370NADH-CYTOCHROME B5 REDUCTASEInterproscan
PTHR45786DNA BINDING PROTEIN-LIKEInterproscan
PTHR35810CYTOPLASMIC PROTEIN-RELATEDInterproscan
PTHR21422RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNITInterproscan
PTHR12606SENTRIN/SUMO-SPECIFIC PROTEASEInterproscan
PTHR46796HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS-RELATEDInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0071949Molecular FunctionFAD bindingInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0043547Biological Processpositive regulation of GTPase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0016926Biological Processprotein desumoylationInterproscan
GO:0016929Molecular FunctiondeSUMOylase activityInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18270RAB3GAP1; Rab3 GTPase-activating protein catalytic subunit-Ubiquitin systemko04121deepkoala
Exosomeko04147deepkoala

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