Gene detail

Detailed information of g3773.t1 in Montipora capitata

Genomic Location: Sc0000066:262548...263883
NR annotation: XP_015762163.1, PREDICTED: DNA repair protein REV1-like [Acropora digitifera]
Species Montipora capitata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q920Q2	DNA repair protein REV1 OS=Mus musculus OX=10090 GN=Rev1 PE=1 SV=1
Q9UBZ9	DNA repair protein REV1 OS=Homo sapiens OX=9606 GN=REV1 PE=1 SV=1
Q5R4N7	DNA repair protein REV1 OS=Pongo abelii OX=9601 GN=REV1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003771 (this species only)
Ubiquitin family	UBD\|Alpha-Helix\|UBM · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11799 all species →	IMS_C	impB/mucB/samB family C-terminal domain	Domain	Interproscan
PF14377 all species →	UBM	Ubiquitin binding region	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017961 all species →	Domain	DNA polymerase, Y-family, little finger domain	Interproscan
IPR025527 all species →	Conserved_site	HUWE1/REV1, ubiquitin-binding motif	Interproscan
IPR036775 all species →	Homologous_superfamily	DNA polymerase, Y-family, little finger domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45990 all species →	DNA REPAIR PROTEIN REV1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003684 all species →	Molecular Function	damaged DNA binding	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0003887 all species →	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0017125 all species →	Molecular Function	deoxycytidyl transferase activity	Interproscan
GO:0042276 all species →	Biological Process	error-prone translesion synthesis	Interproscan
GO:0070987 all species →	Biological Process	error-free translesion synthesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g3773.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.