Gene detail

Detailed information of g3789.t2 in Tripedalia maipoensis

Genomic Location: scaffold_15:2238582...2271808
NR annotation: no NCBI-NR hit recorded
Species abbreviation TMAIP · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g3789.t2

ATGTCTGTGCTGTGGATTTTAATGGTGCTGGCTATCACGGACTTGGCTCAAGGTGGATTTCCCTGCCCTAAAGAGTGCAAGTGCAGGCGACGCGTTGTTAACTGTTCGGGAAAGAATTTGAAGACCATACCCCGGGCATTGGTGTCTTTCAACAAAGCAAAGCAAGTCCAGGAACTAGACTTATCGCACAATAACCTCGAAAGGATTGACCAAAGTGTGCTTCGACAGTTTGAATACCTCACCAGTTTGCGCCTGAACAATAACCCGCTGAAGAGATTAAATACGTCAACTTTTGAAAATTTTTATCTGCTTAGGGAAATTGACTTGTCTCACACAGCATTAGAGGCAGTTCCTGAATTCAGGAGCCTGTCATTTCTAAGGAGCCTATTCCTTTCCGGAAACAGACTGAATTCAATTCCCCCAAATGCTTTTGTTGGCTGTCCAAACTTGCAAGTCCTATATTTGGACTTCAACTTATTTGAATCAGTGCCATTTGAAGGATTGGCCAGACTGAGATACTTGGAAGCACTATCTCTTGAACACAACCAGATTGAACAGATCAATGACAGAGACTTCCAAGGATTAAGGGGACTTGTCTCGTTGAAACTAAATGCTAATAAGATAAAAGAGGTTGCAAAGAATGGATTTGCTGGCTTGAGGTCACTGAAAAAGCTGAATCTTAAGGAGAACAACCTTGATGTGATACCCAAAGATGCTCTCCAGTCGCTGCATTCATTGGAAGAACTGGACATGGATCAGAATCCAATCCAGAAGATCCCTGCTTTTGCCTTCAGTGGTCTCCCTAAACTATTCAGCATACATGTCTTTGACAACAAGATCACGGAGGTACATCCAACAGCTTTTTCCAACATGCAGTCTTTAAGAAAACTGGTGATCAGTGATATTCACATGGCCAAGTTTCCAAACCTGACAGGCACTGATAACCTGGAAACTTTGGAAGTGACAAATTCCGGATTGACGGAAATTTCGGAGACCCTGTGCAAGGATAGACATGTACTGCAGAATCTCATTCTGTTCGGCAACAAAATCAAGAGTATCCCGAAAATGACAGGATGTAAATACCTGGAGAAGGTGAACTTGGACGGCAACAGAATACGAGTGATCCATGCAGATACGTTTAGTGGCTTGAAATATTTAGAAAGAGTGTCGATATGGCACAACCCTTTGAGGCATTTGCACATCAAGGCTTTTCGGAACTTGCCATCGCTGAAGGCTATCGATTTATCTCAAGTTAACCTCGAAGAATTCCTGGACTTGACAGGGACTAAAAGTCTTCGCACTTTGAGGCTTGCTGGATGCAATCTGAAGAGCATACCCAAGGACTTCTGCACAAACCGTACCTCGCTTCGCTCACTTCAATTGGAGCGCAACAAAATCTACTCGTTGCCAAGTTTAGCTGGATGCAAGGATCTTCGGACGCTTGATCTGATGTATAATTTTATTGATACCATCGACGGCAAACTGAGTGGACTGAGCAGCCTTATGGACCTGTACCTTGACCATAACAAGATTCGATCTATAGGAGAGCACACGCTCGCGGACACGAAGAAACTGGAAAGATTGTCCTTAAATAACAATCTGGTGGAATACATAAATCCAAAAGCATTTGCCAACTTCGAAAGAATCCTAAGCATCTCATTGAGAAACAACCGTTTGACCAGTTTCCCGACAGAAGGACTCCGCACTTTGATGATTGTGGAAACCAAAGGAAATCCTGACCTCAGATATTTCCCAACGCACGATAAACTGCCCAATGTCCGGAAATTGGTGTTGGAGTACCCTTACCATTGCTGTTATTACCTAAAGAAGATAGAAGAGTTGGAAGATGCTCATAAGAAAGTGGCAGACAAAGTTGTTTCCGTCAGTTGGCATTGGGACGATGGTTCTGGTGAAGCGGTATCCTCTGGTTCTTTTATGGAGACACATCCAGAAGCGATCGATGAAGAAGGCATTGAACCTCTATTGAGGAAACTCAATAACGGCACGAAAATTATTTTCGGTCATGAAAGAGACAATCTGGAGGAAAAAGTACCACCCGCCCCCATATTGAGGGAGGGAGAGCAACACCTCCTGCACTCCCTTGTTTGCAGCCCCCCGCCTGACCCATTCTATCCCTGTGACGAGCTGATGGGAAAACAGTGGCTGCGCGTTTGCGTGTGGCTGGTTTTTCTGCTTGCGCTGGTAGGGAACTCTGCCGTGCTGATGGTTTTATTTGCCAACTCCTCCAAAATGGATGTCCAGCGCTTGCTAATCATAAACCTTGCTTTGGCAGACCTCTGTTTGGGTATTTATTTGGGATTTTTAGCCGTCGTGGACATCACCACGTTGGGAGATTTCCGTGCGCACGCCATCGAATGGCAGTTCAGCAACAGATGCAAAACAGCCGGCTTTCTGGCAGTTTTTGCAAGCGAATTGTCGGTGTACACGTTAACAGTTATTACTATCGAACGTTTCGTCACCATCAAGTATTCGATGTACATTGAGAAGCAAGTAACAACGTTCAAGGCTTCGATCATTATGATTTTCGGATGGTTGTTCTCATTGCTTGTCGCCGTATTACCGCTTATTCGTGTTCAAACGGAAGATGGTGATATCTACTTCAGTGACTATACAAAATACAGCGTTTGTCTCCCGTTTGACGTCCCGGACAAGTCTTCGCCGGCCTACGTATATTCGGTTTTCTATCTCGGATTTCTTCTGATTTTCAATCTTCTTGCGTTTATCGTTATCGTCTTTTGCTACATTCGGATCTATCTGACGATCCGTGGGTCCAATGCTTTCAACTCTGGAGATTCTCGTATCGCTCGACGAATGGCTTTGTTGATATTTACCGATTTCGCTTGCTGGTTTCCGATTGCCGTCGTTGCACTTTCAGCCGTTTTTAACGAACCTCTCATCGAAGATTTGTGGATCTCCAAGGTGTTTACTGTCTTTGTATTTCCACTAAATGCGTGTGCCAATCCTTTCCTCTACGCGATTTTTACCAAACAATTTCAGAAGGACTTTTTTTCTCTCTACCGTCACATGAAGGGAGGTGACGCAAGCATGGGCGACAAAATTCGACGGGCCTTGAAAGCCAGTCAGGCAAACTACTCGTCGTTTCGTCGGGGCTCTTCTTGCTCGTTTGTTTTTGGAAGGCGTGGTTCTTCTAAACCCGACGACGTTCGGGCTAATTCGCGTACGTATCGAACTCCGCTTAACACGGACGATGAAAAGAACAATCGGGACGACGTCAGTGCACTTCCCCCGGAGCGAGAAACTTGCCTTTAA

Transcript

g3789.t2

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF01462 all species →	LRRNT	Leucine rich repeat N-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR000372 all species →	Domain	Leucine-rich repeat N-terminal domain	Interproscan
IPR002131 all species →	Family	Glycoprotein hormone receptor family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24372 all species →	GLYCOPROTEIN HORMONE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007189 all species →	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0007190 all species →	Biological Process	activation of adenylate cyclase activity	Interproscan
GO:0008528 all species →	Molecular Function	G protein-coupled peptide receptor activity	Interproscan
GO:0009755 all species →	Biological Process	hormone-mediated signaling pathway	Interproscan
GO:0016500 all species →	Molecular Function	protein-hormone receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g3789.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.