Detailed information of g3828.t1 in Acropora digitifera

Genomic Location: chr2Alt:18121865...18174948
NR annotation: XP_044182513.1, laminin-like protein epi-1 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q61789Laminin subunit alpha-3 OS=Mus musculus OX=10090 GN=Lama3 PE=1 SV=4
P02469Laminin subunit beta-1 OS=Mus musculus OX=10090 GN=Lamb1 PE=1 SV=3
P11046Laminin subunit beta-1 OS=Drosophila melanogaster OX=7227 GN=LanB1 PE=1 SV=4
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02210
all species →		Laminin_G_2Laminin G domainDomainInterproscan
PF00054
all species →		Laminin_G_1Laminin G domainDomainInterproscan
PF00053
all species →		Laminin_EGFLaminin EGF domainDomainInterproscan
PF00055
all species →		Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan
PF00052
all species →		Laminin_BLaminin B (Domain IV)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001791
all species →		DomainLaminin G domainInterproscan
IPR002049
all species →		DomainLaminin-type EGF domainInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR008211
all species →		DomainLaminin, N-terminalInterproscan
IPR000034
all species →		DomainLaminin IVInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR050440
all species →		FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574
all species →		NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009887
all species →		Biological Processanimal organ morphogenesisInterproscan
GO:0009888
all species →		Biological Processtissue developmentInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g3828.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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