Gene detail

Detailed information of g383.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCP4494507.1, reverse transcriptase family protein [Gammaproteobacteria bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8BFV2	PCI domain-containing protein 2 OS=Mus musculus OX=10090 GN=Pcid2 PE=1 SV=1
Q2TBN6	PCI domain-containing protein 2 OS=Bos taurus OX=9913 GN=PCID2 PE=2 SV=1
Q5JVF3	PCI domain-containing protein 2 OS=Homo sapiens OX=9606 GN=PCID2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13426	PAS_9	PAS domain	Domain	Interproscan
PF00005	ABC_tran	ABC transporter	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045114	Family	Csn12 family	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR052807	Family	Mitochondrial translation and respiration regulator	Interproscan
IPR035965	Homologous_superfamily	PAS domain superfamily	Interproscan
IPR000014	Domain	PAS domain	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR039421	Family	Type 1 protein exporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22955	RETROTRANSPOSON	Interproscan
PTHR12732	UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING	Interproscan
PTHR46406	NITRIC OXIDE-ASSOCIATED PROTEIN 1	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR24221	ATP-BINDING CASSETTE SUB-FAMILY B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000973	Biological Process	post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery	Interproscan
GO:0003690	Molecular Function	double-stranded DNA binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0006368	Biological Process	transcription elongation by RNA polymerase II	Interproscan
GO:0016973	Biological Process	poly(A)+ mRNA export from nucleus	Interproscan
GO:0070390	Cellular Component	transcription export complex 2	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0042626	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19828	MTG1; mitochondrial GTPase 1	-	Mitochondrial biogenesis	ko03029	deepkoala