Detailed information of g385.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MYH57166.1, DNA recombination protein RmuC [Boseongicola sp. SB0675_bin_26]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9I4U3DNA recombination protein RmuC homolog OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=rmuC PE=3 SV=1
Q9JWG3DNA recombination protein RmuC homolog OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=rmuC PE=3 SV=1
Q9JXH2DNA recombination protein RmuC homolog OS=Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58) OX=122586 GN=rmuC PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02646RmuCRmuC familyFamilyInterproscan
PF14938SNAPSoluble NSF attachment protein, SNAPRepeatInterproscan
PF01390SEASEA domainFamilyInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003798FamilyDNA recombination RmuCInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR039494FamilyFactor VIII intron 22 proteinInterproscan
IPR036364Homologous_superfamilySEA domain superfamilyInterproscan
IPR000082DomainSEA domainInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR050145FamilyCalmodulin and Centrin Calcium-Binding FamiliesInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30563DNA RECOMBINATION PROTEIN RMUCInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR16797FACTOR VIII-ASSOCIATED GENE 1Interproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR23050CALCIUM BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005769Cellular Componentearly endosomeInterproscan
GO:0099518Biological Processvesicle cytoskeletal traffickingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0030234Molecular Functionenzyme regulator activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02183CALM; calmodulin-Replication and repair-deepkoala
Membrane traffickingko04131deepkoala
Exosomeko04147deepkoala

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