Detailed information of g386.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_173286687.1, type III glutamate--ammonia ligase [Thiomicrorhabdus xiamenensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A9ZPH9Glutamate--methylamine ligase OS=Methylovorus mays OX=184077 PE=1 SV=1
F5RH07Glutamate--methylamine ligase OS=Methyloversatilis universalis (strain ATCC BAA-1314 / DSM 25237 / JCM 13912 / CCUG 52030 / FAM5) OX=1000565 GN=gms PE=1 SV=1
O27612Glutamine synthetase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=glnA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08777RRM_3RNA binding motifDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF00120Gln-synt_CGlutamine synthetase, catalytic domainDomainInterproscan
PF031712OG-FeII_Oxy2OG-Fe(II) oxygenase superfamilyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF08574Iwr1Transcription factor Iwr1 FamilyInterproscan
PF01704UDPGPUTP--glucose-1-phosphate uridylyltransferaseFamilyInterproscan
PF04116FA_hydroxylaseFatty acid hydroxylaseFamilyInterproscan
PF20700MutatorMutator-like transposaseDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR014886DomainLa protein, xRRM domainInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR006630DomainLa-type HTH domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR045180FamilyLa domain containing proteinInterproscan
IPR014746Homologous_superfamilyGlutamine synthetase/guanido kinase, catalytic domainInterproscan
IPR017536FamilyGlutamine synthetase, type IIIInterproscan
IPR036651Homologous_superfamilyGlutamine synthetase, N-terminal domain superfamilyInterproscan
IPR008146DomainGlutamine synthetase, catalytic domainInterproscan
IPR027303Conserved_siteGlutamine synthetase, glycine-rich siteInterproscan
IPR008147DomainGlutamine synthetase, N-terminal domainInterproscan
IPR005123DomainOxoglutarate/iron-dependent dioxygenaseInterproscan
IPR050757FamilyCollagen-modifying Glycosyltransferase 25Interproscan
IPR006620DomainProlyl 4-hydroxylase, alpha subunitInterproscan
IPR044861DomainIsopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domainInterproscan
IPR001006Conserved_siteProcollagen-lysine 5-dioxygenase, conserved siteInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013883DomainTranscription factor Iwr1 domainInterproscan
IPR040218FamilyProbable RNA polymerase II nuclear localization protein SLC7A6OSInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR016267FamilyUTP--glucose-1-phosphate uridylyltransferaseInterproscan
IPR002618FamilyUDPGP familyInterproscan
IPR030511FamilyTetratricopeptide repeat protein 26Interproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR006694DomainFatty acid hydroxylaseInterproscan
IPR050307FamilySterol Desaturase and Related EnzymesInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR049012DomainMutator-like transposase domainInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22792LUPUS LA PROTEIN-RELATEDInterproscan
PTHR43785GAMMA-GLUTAMYLPUTRESCINE SYNTHETASEInterproscan
PTHR10730PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBERInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR31196RNA POLYMERASE II NUCLEAR LOCALIZATION PROTEIN SLC7A6OS-RELATEDInterproscan
PTHR43511-Interproscan
PTHR14781UNCHARACTERIZEDInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11863STEROL DESATURASEInterproscan
PTHR42886RE40534P-RELATEDInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004356Molecular Functionglutamine synthetase activityInterproscan
GO:0006542Biological Processglutamine biosynthetic processInterproscan
GO:0006807Biological Processobsolete nitrogen compound metabolic processInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0008475Molecular Functionprocollagen-lysine 5-dioxygenase activityInterproscan
GO:0017185Biological Processpeptidyl-lysine hydroxylationInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0031418Molecular FunctionL-ascorbic acid bindingInterproscan
GO:0032502Biological Processdevelopmental processInterproscan
GO:0003983Molecular FunctionUTP:glucose-1-phosphate uridylyltransferase activityInterproscan
GO:0006011Biological ProcessUDP-alpha-D-glucose metabolic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005977Biological Processglycogen metabolic processInterproscan
GO:0070569Molecular Functionuridylyltransferase activityInterproscan
GO:0030992Cellular Componentintraciliary transport particle BInterproscan
GO:0035720Biological Processintraciliary anterograde transportInterproscan
GO:0035735Biological Processintraciliary transport involved in cilium assemblyInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0097546Cellular Componentciliary baseInterproscan
GO:0120170Molecular Functionintraciliary transport particle B bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008610Biological Processlipid biosynthetic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0000254Molecular FunctionC-4 methylsterol oxidase activityInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0016126Biological Processsterol biosynthetic processInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006654Biological Processphosphatidic acid biosynthetic processInterproscan
GO:0042171Molecular Functionlysophosphatidic acid acyltransferase activityInterproscan
GO:0052689Molecular Functioncarboxylic ester hydrolase activityInterproscan
GO:0055088Biological Processlipid homeostasisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11090LA, SSB; lupus La protein-Exosomeko04147deepkoala
O-Antigen nucleotide sugar biosynthesisko00541deepkoala
Systemic lupus erythematosusko05322deepkoala

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