Detailed information of g391.t2 in Tripedalia maipoensis

Genomic Location: scaffold_1:21382661...21406949
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16770
all species →
RTT107_BRCT_5Regulator of Ty1 transposition protein 107 BRCT domainDomainInterproscan
PF12796
all species →
Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036420
all species →
Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR002110
all species →
RepeatAnkyrin repeatInterproscan
IPR036770
all species →
Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR001357
all species →
DomainBRCT domainInterproscan
IPR042479
all species →
FamilySMC5-SMC6 complex localization factor protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46677
all species →
SMC5-SMC6 COMPLEX LOCALIZATION FACTOR PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006974
all species →
Biological ProcessDNA damage responseInterproscan
GO:0035861
all species →
Cellular Componentsite of double-strand breakInterproscan
GO:1990166
all species →
Biological Processprotein localization to site of double-strand breakInterproscan
GO:2000781
all species →
Biological Processpositive regulation of double-strand break repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g391.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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