Detailed information of g393.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: PCI25254.1, hypothetical protein COB67_10950 [SAR324 cluster bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P19672Putative rRNA methyltransferase YqxC OS=Bacillus subtilis (strain 168) OX=224308 GN=yqxC PE=3 SV=3
Q06803Hemolysin A OS=Brachyspira hyodysenteriae OX=159 GN=tlyA PE=2 SV=1
P9WJ6216S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=tlyA PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyTHAP
Ubiquitin FamilyULD|UBL|SUMO
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11976Rad60-SLDUbiquitin-2 like Rad60 SUMO-likeFamilyInterproscan
PF01728FtsJFtsJ-like methyltransferaseFamilyInterproscan
PF01479S4S4 domainDomainInterproscan
PF03351DOMONDOMON domainDomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF13613HTH_Tnp_4Helix-turn-helix of DDE superfamily endonucleaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR022617DomainRad60/SUMO-like domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR047048Family16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyAInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR036986Homologous_superfamilyRNA-binding S4 domain superfamilyInterproscan
IPR002942DomainRNA-binding S4 domainInterproscan
IPR002877DomainRibosomal RNA methyltransferase, FtsJ domainInterproscan
IPR000945FamilyDopamine beta-hydroxylase-likeInterproscan
IPR005018DomainDOMON domainInterproscan
IPR045266DomainCopper-dependent monooxygenases, DOMON domainInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR027805DomainTransposase, Helix-turn-helix domainInterproscan
IPR037660FamilyCoiled-coil domain-containing protein 51Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10562SMALL UBIQUITIN-RELATED MODIFIERInterproscan
PTHR32319BACTERIAL HEMOLYSIN-LIKE PROTEINInterproscan
PTHR10157DOPAMINE BETA HYDROXYLASE RELATEDInterproscan
PTHR23080THAP DOMAIN PROTEINInterproscan
PTHR28624COILED-COIL DOMAIN-CONTAINING PROTEIN 51Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016605Cellular ComponentPML bodyInterproscan
GO:0016925Biological Processprotein sumoylationInterproscan
GO:0031386Molecular Functionprotein tag activityInterproscan
GO:0044389Molecular Functionubiquitin-like protein ligase bindingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0032259Biological ProcessmethylationInterproscan
GO:0004500Molecular Functiondopamine beta-monooxygenase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12160SUMO, SMT3; small ubiquitin-related modifier-Cytoskeleton proteinsko04812deepkoala

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