Detailed information of g395.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBA2291874.1, succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Gemmatimonadales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5U3N0Pleckstrin homology domain-containing family A member 8 OS=Danio rerio OX=7955 GN=plekha8 PE=2 SV=1
D2KC46Pleckstrin homology domain-containing family A member 8 OS=Canis lupus familiaris OX=9615 GN=PLEKHA8 PE=1 SV=2
Q80W71Pleckstrin homology domain-containing family A member 8 OS=Mus musculus OX=10090 GN=Plekha8 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13183Fer4_84Fe-4S dicluster domainDomainInterproscan
PF00852Glyco_transf_10Glycosyltransferase family 10 (fucosyltransferase) C-termFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF10294Methyltransf_16Lysine methyltransferaseFamilyInterproscan
PF00067p450Cytochrome P450DomainInterproscan
PF00089TrypsinTrypsinDomainInterproscan
PF13017MaelstrompiRNA pathway germ-plasm componentFamilyInterproscan
PF09011HMG_box_2HMG-box domainDomainInterproscan
PF08718GLTPGlycolipid transfer protein (GLTP)DomainInterproscan
PF00169PHPH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017896Domain4Fe-4S ferredoxin-type, iron-sulphur binding domainInterproscan
IPR050573FamilySuccinate Dehydrogenase/Fumarate Reductase Iron-SulfurInterproscan
IPR009051Homologous_superfamilyAlpha-helical ferredoxinInterproscan
IPR038577Homologous_superfamilyGT10-like, C-terminal domain superfamilyInterproscan
IPR001503FamilyGlycosyl transferase family 10Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR019410FamilyLysine methyltransferaseInterproscan
IPR002401FamilyCytochrome P450, E-class, group IInterproscan
IPR001128FamilyCytochrome P450Interproscan
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR017972Conserved_siteCytochrome P450, conserved siteInterproscan
IPR050705FamilyCytochrome P450 3AInterproscan
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR033116Active_siteSerine proteases, trypsin family, serine active siteInterproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR024970DomainMaelstrom domainInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR039259FamilyProtein maelstromInterproscan
IPR036497Homologous_superfamilyGlycolipid transfer protein superfamilyInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR014830DomainGlycolipid transfer protein domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR050477FamilyGroup II Amino Acid DecarboxylasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11921SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEINInterproscan
PTHR11929ALPHA- 1,3 -FUCOSYLTRANSFERASEInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR14614HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGENInterproscan
PTHR24302CYTOCHROME P450 FAMILY 3Interproscan
PTHR24250CHYMOTRYPSIN-RELATEDInterproscan
PTHR21358PROTEIN MAELSTROM HOMOLOGInterproscan
PTHR10219GLYCOLIPID TRANSFER PROTEIN-RELATEDInterproscan
PTHR42735-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0009060Biological Processaerobic respirationInterproscan
GO:0022904Biological Processrespiratory electron transport chainInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0008417Molecular Functionfucosyltransferase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0036065Biological ProcessfucosylationInterproscan
GO:0046920Molecular Functionalpha-(1->3)-fucosyltransferase activityInterproscan
GO:0018064Molecular Functionprotein-L-histidine N-tele-methyltransferase activityInterproscan
GO:0042038Biological Processpeptidyl-histidine methylation, to form tele-methylhistidineInterproscan
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0008395Molecular Functionsteroid hydroxylase activityInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0060964Biological Processregulation of miRNA-mediated gene silencingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0007140Biological Processmale meiotic nuclear divisionInterproscan
GO:0007283Biological ProcessspermatogenesisInterproscan
GO:0034587Biological ProcesspiRNA processingInterproscan
GO:0043186Cellular ComponentP granuleInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0120009Biological Processintermembrane lipid transferInterproscan
GO:0120013Molecular Functionlipid transfer activityInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18740EXD1, EGL; exonuclease 3'-5' domain-containing protein 1-Carbon fixation pathways in prokaryotesko00720deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala
Chromosome and associated proteinsko03036deepkoala
Messenger RNA biogenesisko03019deepkoala

TOP