Gene detail

Detailed information of g399.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCH2301901.1, UxaA family hydrolase [SAR324 cluster bacterium]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q58Y43	(2R)-sulfolactate sulfo-lyase subunit beta OS=Paracoccus pantotrophus OX=82367 GN=suyB PE=1 SV=1
Q1QWP0	(2R)-sulfolactate sulfo-lyase subunit beta OS=Chromohalobacter salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 / 1H11) OX=290398 GN=suyB PE=1 SV=1
O34673	Altronate dehydratase OS=Bacillus subtilis (strain 168) OX=224308 GN=uxaA PE=2 SV=2

Gene family	Subfamily
Transcription Factors Family	zf-LITAF-like

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02146	SIR2	Sir2 family	Family	Interproscan
PF12736	CABIT	Cell-cycle sustaining, positive selection,	Domain	Interproscan
PF07647	SAM_2	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF20629	GD_AH_C	D-galactarate/Altronate dehydratase, C-terminal	Domain	Interproscan
PF04295	GD_AH_second	D-galactarate dehydratase/Altronate hydrolase, second domain	Domain	Interproscan
PF10601	zf-LITAF-like	LITAF-like zinc ribbon domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050134	Family	NAD-dependent sirtuin protein deacylases	Interproscan
IPR003000	Family	Sirtuin family	Interproscan
IPR026590	Domain	Sirtuin family, catalytic core domain	Interproscan
IPR029035	Homologous_superfamily	DHS-like NAD/FAD-binding domain superfamily	Interproscan
IPR013761	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR001660	Domain	Sterile alpha motif domain	Interproscan
IPR025946	Domain	CABIT domain	Interproscan
IPR052281	Family	GRB2-associated and regulator of MAPK	Interproscan
IPR052172	Family	UxaA family altronate/galactarate dehydratases	Interproscan
IPR048332	Domain	D-galactarate/Altronate dehydratase, C-terminal domain	Interproscan
IPR007392	Domain	D-galactarate/Altronate dehydratase, second domain	Interproscan
IPR006629	Domain	LPS-induced tumour necrosis factor alpha factor	Interproscan
IPR037519	Family	LITAF domain containing protein	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR039740	Family	CCR4-NOT transcription complex subunit 10	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11085	NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED	Interproscan
PTHR14454	GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER	Interproscan
PTHR30536	ALTRONATE/GALACTARATE DEHYDRATASE	Interproscan
PTHR47018	CXC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR23292	LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR	Interproscan
PTHR12979	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005759	Cellular Component	mitochondrial matrix	Interproscan
GO:0070403	Molecular Function	NAD+ binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0019698	Biological Process	D-galacturonate catabolic process	Interproscan
GO:0016829	Molecular Function	lyase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0006402	Biological Process	mRNA catabolic process	Interproscan
GO:0017148	Biological Process	negative regulation of translation	Interproscan
GO:0030014	Cellular Component	CCR4-NOT complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12607	CNOT10; CCR4-NOT transcription complex subunit 10	-	Cysteine and methionine metabolism	ko00270	deepkoala
			Lysosome	ko04142	deepkoala
			Messenger RNA biogenesis	ko03019	deepkoala