Detailed information of g40.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_087110640.1, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [Parendozoicomonas haliclonae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P73138S-(hydroxymethyl)glutathione dehydrogenase OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) OX=1111708 GN=frmA PE=3 SV=1
P39450S-(hydroxymethyl)glutathione dehydrogenase OS=Photobacterium damsela subsp. piscicida OX=38294 GN=frmA PE=3 SV=1
A2XAZ3Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica OX=39946 GN=ADHIII PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04729ASF1_hist_chapASF1 like histone chaperoneFamilyInterproscan
PF00067p450Cytochrome P450DomainInterproscan
PF00787PXPX domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03732Retrotrans_gagRetrotransposon gag protein FamilyInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF16455UBDUbiquitin-binding domainDomainInterproscan
PF00107ADH_zinc_NZinc-binding dehydrogenaseDomainInterproscan
PF17789MG4Macroglobulin domain MG4DomainInterproscan
PF07703A2M_BRDAlpha-2-macroglobulin bait region domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR001128FamilyCytochrome P450Interproscan
IPR006818FamilyHistone chaperone ASF1-likeInterproscan
IPR036747Homologous_superfamilyHistone chaperone ASF1-like superfamilyInterproscan
IPR002401FamilyCytochrome P450, E-class, group IInterproscan
IPR017972Conserved_siteCytochrome P450, conserved siteInterproscan
IPR050705FamilyCytochrome P450 3AInterproscan
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan
IPR043544FamilySorting nexin-10/11Interproscan
IPR001683DomainPhox homologyInterproscan
IPR040108FamilyLaa1/Sip1/HEATR5Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR005162DomainRetrotransposon gag domainInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR032752DomainDC-UbP/UBTD2, N-terminal domainInterproscan
IPR011032Homologous_superfamilyGroES-like superfamilyInterproscan
IPR013149DomainAlcohol dehydrogenase-like, C-terminalInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR050473FamilyAlpha-2-macroglobulin/Complement systemInterproscan
IPR040839DomainMacroglobulin domain MG4Interproscan
IPR011625DomainAlpha-2-macroglobulin, bait region domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24302CYTOCHROME P450 FAMILY 3Interproscan
PTHR46209PX DOMAIN-CONTAINING PROTEINInterproscan
PTHR21663HYPOTHETICAL HEAT DOMAIN-CONTAININGInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33064POL PROTEINInterproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR43880ALCOHOL DEHYDROGENASEInterproscan
PTHR11412MACROGLOBULIN / COMPLEMENTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006325Biological Processchromatin organizationInterproscan
GO:0008395Molecular Functionsteroid hydroxylase activityInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016050Biological Processvesicle organizationInterproscan
GO:1901981Molecular Functionphosphatidylinositol phosphate bindingInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0008104Biological Processprotein localizationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030139Cellular Componentendocytic vesicleInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:0004024Molecular Functionobsolete alcohol dehydrogenase (NAD+) activity, zinc-dependentInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046294Biological Processformaldehyde catabolic processInterproscan
GO:0051903Molecular FunctionS-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activityInterproscan

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