Detailed information of g404.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047135091.1, protocadherin-like protein [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B8V7Q1Protocadherin-like protein OS=Acropora millepora OX=45264 PE=1 SV=1
Q5F226Protocadherin Fat 2 OS=Mus musculus OX=10090 GN=Fat2 PE=1 SV=1
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF00054Laminin_G_1Laminin G domainDomainInterproscan
PF01049CADH_Y-type_LIRCadherin, Y-type LIR-motifFamilyInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF00612IQIQ calmodulin-binding motifMotifInterproscan
PF00702Hydrolasehaloacid dehalogenase-like hydrolaseDomainInterproscan
PF00930DPPIV_NDipeptidyl peptidase IV (DPP IV) N-terminal regionRepeatInterproscan
PF04857CAF1CAF1 family ribonucleaseFamilyInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050198FamilyNon-receptor tyrosine kinases involved in cell signalingInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR008266Active_siteTyrosine-protein kinase, active siteInterproscan
IPR020635DomainTyrosine-protein kinase, catalytic domainInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR000233DomainCadherin, Y-type LIR-motifInterproscan
IPR039808FamilyCadherinInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR027397Homologous_superfamilyCatenin binding domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR016181Homologous_superfamilyAcyl-CoA N-acyltransferaseInterproscan
IPR051185FamilyAbnormal Spindle-like Microcephaly-associatedInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000048Binding_siteIQ motif, EF-hand binding siteInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR036412Homologous_superfamilyHAD-like superfamilyInterproscan
IPR050155FamilyHAD-like hydrolase superfamilyInterproscan
IPR023198Homologous_superfamilyPhosphoglycolate phosphatase-like, domain 2Interproscan
IPR023214Homologous_superfamilyHAD superfamilyInterproscan
IPR050278FamilySerine Protease S9B/DPPIV SubfamilyInterproscan
IPR002469DomainDipeptidylpeptidase IV, N-terminal domainInterproscan
IPR006941FamilyRibonuclease CAF1Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR039637FamilyCCR4-NOT transcription complex subunit 7/8/Pop2Interproscan
IPR050230FamilyCalcium-Regulated Muscle Contraction and Cellular ProcessInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24418TYROSINE-PROTEIN KINASEInterproscan
PTHR24027CADHERIN-23Interproscan
PTHR46113SNAC DOMAIN-CONTAINING PROTEINInterproscan
PTHR22706UNCHARACTERIZEDInterproscan
PTHR43434PHOSPHOGLYCOLATE PHOSPHATASEInterproscan
PTHR11731PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATEDInterproscan
PTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITInterproscan
PTHR23048MYOSIN LIGHT CHAIN 1, 3Interproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004713Molecular Functionprotein tyrosine kinase activityInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0000922Cellular Componentspindle poleInterproscan
GO:0005516Molecular Functioncalmodulin bindingInterproscan
GO:0007051Biological Processspindle organizationInterproscan
GO:0051295Biological Processestablishment of meiotic spindle localizationInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008239Molecular Functiondipeptidyl-peptidase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0004535Molecular Functionpoly(A)-specific ribonuclease activityInterproscan
GO:0030014Cellular ComponentCCR4-NOT complexInterproscan
GO:0030015Cellular ComponentCCR4-NOT core complexInterproscan
GO:0043928Biological Processobsolete exonucleolytic catabolism of deadenylated mRNAInterproscan
GO:0016460Cellular Componentmyosin II complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12581CNOT7_8, CAF1, POP2; CCR4-NOT transcription complex subunit 7/8-Ubiquitin systemko04121deepkoala
Exosomeko04147deepkoala
Messenger RNA biogenesisko03019deepkoala

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