Detailed information of g406.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047138925.1, tubulin polymerization-promoting protein family member 2-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4R3A0Tubulin polymerization-promoting protein family member 2 OS=Macaca fascicularis OX=9541 GN=TPPP2 PE=2 SV=1
P59282Tubulin polymerization-promoting protein family member 2 OS=Homo sapiens OX=9606 GN=TPPP2 PE=1 SV=2
Q0P5Y3Tubulin polymerization-promoting protein family member 2 OS=Mus musculus OX=10090 GN=Tppp2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00071RasRas familyDomainInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF14966DNA_repr_REX1BDNA repair REX1-BFamilyInterproscan
PF03133TTLTubulin-tyrosine ligase familyFamilyInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05517p25-alphap25-alpha DomainInterproscan
PF09725Fra10Ac1Folate-sensitive fragile site protein Fra10Ac1FamilyInterproscan
PF02184HATHAT (Half-A-TPR) repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR051065FamilyRas-related small GTPaseInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR047144FamilyBCL-6 corepressor-likeInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR039491FamilyRequired for excision 1-B domain-containing proteinInterproscan
IPR004344FamilyTubulin-tyrosine ligase/Tubulin polyglutamylaseInterproscan
IPR053317FamilyTubulin polyglutamylaseInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR008907FamilyTubulin polymerization-promoting proteinInterproscan
IPR019129FamilyFolate-sensitive fragile site protein Fra10Ac1Interproscan
IPR003107RepeatHAT (Half-A-TPR) repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR045075FamilyPre-mRNA-splicing factor Syf1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45704RAS-LIKE FAMILY MEMBER 11Interproscan
PTHR24117AGAP007537-PBInterproscan
PTHR46601ULP_PROTEASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47113LD09343PInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR12932P25 ALPHA-RELATEDInterproscan
PTHR11246PRE-MRNA SPLICING FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0036211Biological Processprotein modification processInterproscan
GO:0015631Molecular Functiontubulin bindingInterproscan
GO:0046785Biological Processmicrotubule polymerizationInterproscan
GO:0001578Biological Processmicrotubule bundle formationInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0032273Biological Processpositive regulation of protein polymerizationInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0000245Biological Processspliceosomal complex assemblyInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000974Cellular ComponentPrp19 complexInterproscan
GO:0071007Cellular ComponentU2-type catalytic step 2 spliceosomeInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0071014Cellular Componentpost-mRNA release spliceosomal complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02109ATPF0B, atpF; F-type H+-transporting ATPase subunit b-Cytoskeleton proteinsko04812deepkoala
Spliceosomeko03041deepkoala
Photosynthesis proteinsko00194deepkoala

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