Detailed information of g413.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020616720.1, cation channel sperm-associated protein subunit beta-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2RTF1Cation channel sperm-associated auxiliary subunit beta OS=Mus musculus OX=10090 GN=Catsperb PE=1 SV=1
Q9H7T0Cation channel sperm-associated auxiliary subunit beta OS=Homo sapiens OX=9606 GN=CATSPERB PE=1 SV=2
O88576Sodium-dependent neutral amino acid transporter B(0)AT3 OS=Mus musculus OX=10090 GN=Slc6a18 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF15149CATSPERBCation channel sperm-associated protein subunit beta protein familyFamilyInterproscan
PF00067p450Cytochrome P450DomainInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF05270AbfBAlpha-L-arabinofuranosidase B (ABFB) domainDomainInterproscan
PF00209SNFSodium:neurotransmitter symporter familyFamilyInterproscan
PF13432TPR_16Tetratricopeptide repeatRepeatInterproscan
PF14932HAUS-augmin3HAUS augmin-like complex subunit 3FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR036361Homologous_superfamilySAP domain superfamilyInterproscan
IPR048789DomainCation channel sperm-associated protein subunit beta, C-terminal domainInterproscan
IPR028748FamilyCation channel sperm-associated auxiliary subunit betaInterproscan
IPR001128FamilyCytochrome P450Interproscan
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR017972Conserved_siteCytochrome P450, conserved siteInterproscan
IPR002403FamilyCytochrome P450, E-class, group IVInterproscan
IPR050479FamilyCytochrome P450, families 11 and 27Interproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006028FamilyGamma-aminobutyric acid A receptor/Glycine receptor alphaInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR036195Homologous_superfamilyAlpha-L-arabinofuranosidase B, arabinose-binding domain superfamilyInterproscan
IPR007934DomainAlpha-L-arabinofuranosidase B, arabinose-binding domainInterproscan
IPR000175FamilySodium:neurotransmitter symporterInterproscan
IPR037272Homologous_superfamilySodium:neurotransmitter symporter superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR052384FamilyO-mannosyl-transferase TMTCInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR003107RepeatHAT (Half-A-TPR) repeatInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR026206FamilyHAUS augmin-like complex subunit 3Interproscan
IPR032733DomainHAUS augmin-like complex subunit 3, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR14705CATION CHANNEL SPERM-ASSOCIATED PROTEIN SUBUNIT BETAInterproscan
PTHR24279-Interproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR11616SODIUM/CHLORIDE DEPENDENT TRANSPORTERInterproscan
PTHR44216PROTEIN O-MANNOSYL-TRANSFERASE TMTC2Interproscan
PTHR19378GOLGIN- RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005929Cellular ComponentciliumInterproscan
GO:0036128Cellular ComponentCatSper complexInterproscan
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0005743Cellular Componentmitochondrial inner membraneInterproscan
GO:0006700Biological ProcessC21-steroid hormone biosynthetic processInterproscan
GO:0006704Biological Processglucocorticoid biosynthetic processInterproscan
GO:0008203Biological Processcholesterol metabolic processInterproscan
GO:0034650Biological Processcortisol metabolic processInterproscan
GO:0071375Biological Processcellular response to peptide hormone stimulusInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0005231Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005254Molecular Functionchloride channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:1902476Biological Processchloride transmembrane transportInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0046373Biological ProcessL-arabinose metabolic processInterproscan
GO:0046556Molecular Functionalpha-L-arabinofuranosidase activityInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000030Molecular Functionmannosyltransferase activityInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0035269Biological Processprotein O-linked mannosylationInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0007098Biological Processcentrosome cycleInterproscan
GO:0051225Biological Processspindle assemblyInterproscan
GO:0070652Cellular ComponentHAUS complexInterproscan
GO:0072686Cellular Componentmitotic spindleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05048SLC6A15S; solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20-Transportersko02000deepkoala

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