Detailed information of g417.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3024954.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q2HJ23Microtubule-associated protein 1 light chain 3 alpha OS=Bos taurus OX=9913 GN=MAP1LC3A PE=2 SV=1
Q9H492Microtubule-associated protein 1 light chain 3 alpha OS=Homo sapiens OX=9606 GN=MAP1LC3A PE=1 SV=2
Q91VR7Microtubule-associated protein 1 light chain 3 alpha OS=Mus musculus OX=10090 GN=Map1lc3a PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UBL|ATG8

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03446NAD_binding_2NAD binding domain of 6-phosphogluconate dehydrogenaseDomainInterproscan
PF003936PGD6-phosphogluconate dehydrogenase, C-terminal domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF12906RINGvRING-variant domainDomainInterproscan
PF16414NPC1_NNiemann-Pick C1 N terminusDomainInterproscan
PF02991ATG8Autophagy protein Atg8 ubiquitin likeDomainInterproscan
PF14631FancD2Fanconi anaemia protein FancD2 nucleaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR008927Homologous_superfamily6-phosphogluconate dehydrogenase-like, C-terminal domain superfamilyInterproscan
IPR006183Family6-phosphogluconate dehydrogenaseInterproscan
IPR006113Family6-phosphogluconate dehydrogenase, decarboxylatingInterproscan
IPR006184Binding_site6-phosphogluconate-binding siteInterproscan
IPR006115Domain6-phosphogluconate dehydrogenase, NADP-bindingInterproscan
IPR006114Domain6-phosphogluconate dehydrogenase, C-terminalInterproscan
IPR013328Homologous_superfamily6-phosphogluconate dehydrogenase, domain 2Interproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR011016DomainZinc finger, RING-CH-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR032190DomainNiemann-Pick C1, N-terminalInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR004241FamilyAutophagy protein Atg8 ubiquitin-likeInterproscan
IPR045197FamilyNuclear pore membrane glycoprotein 210-likeInterproscan
IPR029448FamilyFanconi anaemia protein FANCD2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR118116-PHOSPHOGLUCONATE DEHYDROGENASEInterproscan
PTHR46043ARM REPEAT SUPERFAMILY PROTEINInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR46065E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBERInterproscan
PTHR45727NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1Interproscan
PTHR10969MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATEDInterproscan
PTHR23019NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004616Molecular Functionphosphogluconate dehydrogenase (decarboxylating) activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0009051Biological Processpentose-phosphate shunt, oxidative branchInterproscan
GO:0046177Biological ProcessD-gluconate catabolic processInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0006098Biological Processpentose-phosphate shuntInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0015485Molecular Functioncholesterol bindingInterproscan
GO:0015918Biological Processsterol transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030299Biological Processintestinal cholesterol absorptionInterproscan
GO:0032934Molecular Functionsterol bindingInterproscan
GO:0042632Biological Processcholesterol homeostasisInterproscan
GO:0000045Biological Processautophagosome assemblyInterproscan
GO:0000421Cellular Componentautophagosome membraneInterproscan
GO:0000422Biological Processautophagy of mitochondrionInterproscan
GO:0005776Cellular ComponentautophagosomeInterproscan
GO:0006995Biological Processcellular response to nitrogen starvationInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0016236Biological ProcessmacroautophagyInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan
GO:0097352Biological Processautophagosome maturationInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0006281Biological ProcessDNA repairInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00033PGD, gnd, gntZ; 6-phosphogluconate dehydrogenaseEC:1.1.1.44
EC:1.1.1.343
Cytoskeleton proteinsko04812deepkoala
Glutathione metabolismko00480deepkoala

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