Detailed information of g4199.t2 in Tripedalia maipoensis

Genomic Location: scaffold_16:5985986...6020819
NR annotation: no NCBI-NR hit recorded
Species abbreviation TMAIP · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13920
all species →		zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00642
all species →		zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF18384
all species →		zf_CCCH_5Unkempt Zinc finger domain 1 (Znf1)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan
IPR045234
all species →		FamilyRING finger protein Unkempt-likeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036855
all species →		Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR040594
all species →		DomainUnkempt, zinc finger domain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14493
all species →		UNKEMPT FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23047UNKL; E3 ubiquitin-protein ligase UNKLEC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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