Genomic Location: scaffold_16:6814752...6856925
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families
| CDS |
| g4207.t1 |
| Transcript |
| g4207.t1 |
| Protein |
| g4207.t1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | UBD|Alpha-Helix|VHS · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00790 all species → | VHS | VHS domain | Repeat | Interproscan |
| PF03127 all species → | GAT | GAT domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR038425 all species → | Homologous_superfamily | GAT domain superfamily | Interproscan |
| IPR002014 all species → | Domain | VHS domain | Interproscan |
| IPR014645 all species → | Family | Target of Myb protein 1 | Interproscan |
| IPR004152 all species → | Domain | GAT domain | Interproscan |
| IPR008942 all species → | Homologous_superfamily | ENTH/VHS | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13856 all species → | VHS DOMAIN CONTAINING PROTEIN FAMILY | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005768 all species → | Cellular Component | endosome | Interproscan |
| GO:0007165 all species → | Biological Process | signal transduction | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0030276 all species → | Molecular Function | clathrin binding | Interproscan |
| GO:0035091 all species → | Molecular Function | phosphatidylinositol binding | Interproscan |
| GO:0043130 all species → | Molecular Function | ubiquitin binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K26401 | TOM1, TOM1L1_2; target of Myb membrane trafficking protein 1 and related proteins | - | Membrane trafficking | ko04131 | deepkoala |
