Detailed information of g422.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_048585977.1, dynein axonemal assembly factor 11 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3DH20Dynein axonemal assembly factor 11 OS=Danio rerio OX=7955 GN=dnaaf11 PE=1 SV=1
A0A1L8G016Dynein axonemal assembly factor 11 OS=Xenopus laevis OX=8355 GN=dnaaf11 PE=3 SV=1
Q28FY0Dynein axonemal assembly factor 11 OS=Xenopus tropicalis OX=8364 GN=dnaaf11 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16367RRM_7RNA recognition motifDomainInterproscan
PF01770Folate_carrierReduced folate carrierFamilyInterproscan
PF00755Carn_acyltransfCholine/Carnitine o-acyltransferaseFamilyInterproscan
PF13589HATPase_c_3Histidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan
PF17942Morc6_S5Morc6 ribosomal protein S5 domain 2-likeFamilyInterproscan
PF07496zf-CWCW-type Zinc FingerDomainInterproscan
PF14580LRR_9Leucine-rich repeatRepeatInterproscan
PF03781FGE-sulfataseSulfatase-modifying factor enzyme 1DomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF00035dsrmDouble-stranded RNA binding motifDomainInterproscan
PF11942Spt5_NSpt5 transcription elongation factor, acidic N-terminalDomainInterproscan
PF00467KOWKOW motifFamilyInterproscan
PF03439Spt5-NGNEarly transcription elongation factor of RNA pol II, NGN sectionFamilyInterproscan
PF00888CullinCullin familyRepeatInterproscan
PF10557Cullin_Nedd8Cullin protein neddylation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR034977DomainCPEB-1, RNA recognition motif 1Interproscan
IPR034819FamilyCytoplasmic polyadenylation element-binding proteinInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR002666FamilyReduced folate carrierInterproscan
IPR036508Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR039551DomainCholine/carnitine acyltransferase domainInterproscan
IPR042231Homologous_superfamilyCholine/Carnitine o-acyltransferase, domain 2Interproscan
IPR023213Homologous_superfamilyChloramphenicol acetyltransferase-like domain superfamilyInterproscan
IPR000542FamilyAcyltransferase ChoActase/COT/CPTInterproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR041006DomainMorc, S5 domain 2-likeInterproscan
IPR011124DomainZinc finger, CW-typeInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR003603DomainU2A'/phosphoprotein 32 family A, C-terminalInterproscan
IPR005532DomainSulfatase-modifying factor enzymeInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR042095Homologous_superfamilySulfatase-modifying factor enzyme superfamilyInterproscan
IPR051043FamilySulfatase Modifying Factor and KinaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR050221Family26S Proteasome Regulatory ATPaseInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR051740FamilyDouble-stranded RNA-binding domain-containing proteinInterproscan
IPR014720DomainDouble-stranded RNA-binding domainInterproscan
IPR041975DomainSpt5, KOW domain repeat 2Interproscan
IPR022581DomainSpt5 transcription elongation factor, N-terminalInterproscan
IPR014722Homologous_superfamilyLarge ribosomal subunit protein uL2, domain 2Interproscan
IPR006645DomainNusG-like, N-terminalInterproscan
IPR005824DomainKOWInterproscan
IPR041973DomainSpt5, KOW domain repeat 1Interproscan
IPR024945DomainSpt5 C-terminal domainInterproscan
IPR039659FamilyTranscription elongation factor SPT5Interproscan
IPR017071FamilyTranscription elongation factor Spt5, eukaryoteInterproscan
IPR008991Homologous_superfamilyTranslation protein SH3-like domain superfamilyInterproscan
IPR039385DomainNGN domain, eukaryoticInterproscan
IPR041977DomainSpt5, KOW domain repeat 4Interproscan
IPR036735Homologous_superfamilyNusG, N-terminal domain superfamilyInterproscan
IPR041978DomainSpt5, KOW domain repeat 5Interproscan
IPR041976DomainSpt5, KOW domain repeat 3Interproscan
IPR041980DomainSpt5, KOW domain repeat 6Interproscan
IPR005100DomainNGN domainInterproscan
IPR016158DomainCullin homology domainInterproscan
IPR045093FamilyCullinInterproscan
IPR001373DomainCullin, N-terminalInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR016159Homologous_superfamilyCullin repeat-like-containing domain superfamilyInterproscan
IPR019559DomainCullin protein, neddylation domainInterproscan
IPR036317Homologous_superfamilyCullin homology domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12566CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEBInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR10686FOLATE TRANSPORTERInterproscan
PTHR22589CARNITINE O-ACYLTRANSFERASEInterproscan
PTHR23337ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 1Interproscan
PTHR18849LEUCINE RICH REPEAT PROTEINInterproscan
PTHR23150SULFATASE MODIFYING FACTOR 1, 2Interproscan
PTHR2307326S PROTEASOME REGULATORY SUBUNITInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR46054MATERNAL EFFECT PROTEIN STAUFENInterproscan
PTHR11125SUPPRESSOR OF TY 5Interproscan
PTHR11932CULLINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000900Molecular FunctionmRNA regulatory element binding translation repressor activityInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006417Biological Processregulation of translationInterproscan
GO:0008135Molecular Functiontranslation factor activity, RNA bindingInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0043022Molecular Functionribosome bindingInterproscan
GO:0045182Molecular Functiontranslation regulator activityInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:1990124Cellular Componentobsolete messenger ribonucleoprotein complexInterproscan
GO:2000766Biological Processnegative regulation of cytoplasmic translationInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0051180Biological Processvitamin transportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0090482Molecular Functionvitamin transmembrane transporter activityInterproscan
GO:0008061Molecular Functionchitin bindingInterproscan
GO:0005777Cellular ComponentperoxisomeInterproscan
GO:0008458Molecular Functioncarnitine O-octanoyltransferase activityInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0036158Biological Processouter dynein arm assemblyInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0008540Cellular Componentproteasome regulatory particle, base subcomplexInterproscan
GO:0036402Molecular Functionproteasome-activating activityInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0003725Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0007281Biological Processgerm cell developmentInterproscan
GO:0008298Biological Processintracellular mRNA localizationInterproscan
GO:0010494Cellular Componentcytoplasmic stress granuleInterproscan
GO:0035418Biological Processprotein localization to synapseInterproscan
GO:0043025Cellular Componentneuronal cell bodyInterproscan
GO:0098964Biological Processanterograde dendritic transport of messenger ribonucleoprotein complexInterproscan
GO:0006354Biological ProcessDNA-templated transcription elongationInterproscan
GO:0140673Biological Processtranscription elongation-coupled chromatin remodelingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0032044Cellular ComponentDSIF complexInterproscan
GO:0032784Biological Processregulation of DNA-templated transcription elongationInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031461Cellular Componentcullin-RING ubiquitin ligase complexInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan
GO:0080008Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20102YTHDF; YTH domain-containing family protein-Cytoskeleton proteinsko04812deepkoala
Chromosome and associated proteinsko03036deepkoala
Messenger RNA biogenesisko03019deepkoala
Messenger RNA biogenesisko03019deepkoala

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