Detailed information of g423.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_033643407.1, uncharacterized protein LOC117303346 [Asterias rubens]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O43295SLIT-ROBO Rho GTPase-activating protein 3 OS=Homo sapiens OX=9606 GN=SRGAP3 PE=1 SV=3
Q812A2SLIT-ROBO Rho GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Srgap3 PE=1 SV=1
Q7Z6B7SLIT-ROBO Rho GTPase-activating protein 1 OS=Homo sapiens OX=9606 GN=SRGAP1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13450NAD_binding_8NAD(P)-binding Rossmann-like domainDomainInterproscan
PF07156Prenylcys_lyasePrenylcysteine lyaseFamilyInterproscan
PF01085HH_signalHedgehog amino-terminal signalling domainDomainInterproscan
PF11277Med24_NMediator complex subunit 24 N-terminalFamilyInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF01079HintHint moduleFamilyInterproscan
PF00611FCHFes/CIP4, and EFC/F-BAR homology domainFamilyInterproscan
PF08393DHC_N2Dynein heavy chain, N-terminal region 2FamilyInterproscan
PF00169PHPH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002126DomainCadherin-likeInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR010795DomainPrenylcysteine lyaseInterproscan
IPR017046FamilyPrenylcysteine oxidaseInterproscan
IPR050387FamilyHedgehog SignalingInterproscan
IPR000320DomainHedgehog, N-terminal signalling domainInterproscan
IPR009045Homologous_superfamilyHedgehog signalling/DD-peptidase zinc-binding domain superfamilyInterproscan
IPR001657FamilyHedgehog proteinInterproscan
IPR021429FamilyMediator complex, subunit Med24,Interproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR036844Homologous_superfamilyHint domain superfamilyInterproscan
IPR001767DomainHedgehog protein, Hint domainInterproscan
IPR027267Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR051627FamilySLIT-ROBO Rho GTPase-activatingInterproscan
IPR001060DomainFCH domainInterproscan
IPR031160DomainF-BAR domainInterproscan
IPR042228Homologous_superfamilyDynein heavy chain, linker, subdomain 3Interproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR042222Homologous_superfamilyDynein heavy chain, domain 2, N-terminalInterproscan
IPR013602DomainDynein heavy chain, linkerInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15944FARNESYLCYSTEINE LYASEInterproscan
PTHR11889HEDGEHOGInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR14166SLIT-ROBO RHO GTPASE ACTIVATING PROTEINInterproscan
PTHR10676DYNEIN HEAVY CHAIN FAMILY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016670Molecular Functionoxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptorInterproscan
GO:0030328Biological Processprenylcysteine catabolic processInterproscan
GO:0001735Molecular Functionprenylcysteine oxidase activityInterproscan
GO:0030327Biological Processprenylated protein catabolic processInterproscan
GO:0001708Biological Processcell fate specificationInterproscan
GO:0005113Molecular Functionpatched bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0007224Biological Processsmoothened signaling pathwayInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0007267Biological Processcell-cell signalingInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016592Cellular Componentmediator complexInterproscan
GO:0016540Biological Processprotein autoprocessingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030336Biological Processnegative regulation of cell migrationInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0008569Molecular Functionminus-end-directed microtubule motor activityInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0060294Biological Processcilium movement involved in cell motilityInterproscan
GO:0097729Cellular Component9+2 motile ciliumInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20235RAW; raw-MAPK signaling pathway - flyko04013deepkoala

TOP