Detailed information of g428.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: KXJ17176.1, PHD finger protein 20-like protein 1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A2VE56PHD finger protein 20-like protein 1 OS=Bos taurus OX=9913 GN=PHF20L1 PE=2 SV=1
Q4V9H5PHD finger protein 20-like protein 1 OS=Rattus norvegicus OX=10116 GN=Phf20l1 PE=1 SV=2
Q8CCJ9PHD finger protein 20-like protein 1 OS=Mus musculus OX=10090 GN=Phf20l1 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyCSD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20826PHD_5PhD finger domainDomainInterproscan
PF02820MBTmbt repeatDomainInterproscan
PF01431Peptidase_M13Peptidase family M13FamilyInterproscan
PF13738Pyr_redox_3Pyridine nucleotide-disulphide oxidoreductaseFamilyInterproscan
PF06916FAM210A-B_domFAM210A/B-like domainDomainInterproscan
PF00428Ribosomal_60s60s Acidic ribosomal proteinFamilyInterproscan
PF00313CSD'Cold-shock' DNA-binding domainDomainInterproscan
PF00735SeptinSeptinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR002999DomainTudor domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR043449FamilyPHD finger protein 20-likeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR004092RepeatMbt repeatInterproscan
IPR018497DomainPeptidase M13, C-terminal domainInterproscan
IPR000718FamilyPeptidase M13Interproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR029731FamilyOKL38 familyInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR045866FamilyProtein FAM210A/B-likeInterproscan
IPR009688DomainProtein FAM210A/B-like domainInterproscan
IPR033467DomainTesmin/TSO1-like CXC domainInterproscan
IPR027534FamilyLarge ribosomal subunit protein P1/P2Interproscan
IPR038716Homologous_superfamilyLarge ribosomal subunit protein P1/P2, N-terminal domainInterproscan
IPR000569DomainHECT domainInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR052069FamilyCalcium-regulated mRNA-binding domain-containing proteinInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR002059DomainCold-shock protein, DNA-bindingInterproscan
IPR011129DomainCold shock domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR030379DomainSeptin-type guanine nucleotide-binding (G) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR15856PHD FINGER PROTEIN 20-RELATEDInterproscan
PTHR11733ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATEDInterproscan
PTHR15192PROTEIN CBG05349Interproscan
PTHR21377UNCHARACTERIZEDInterproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR4569660S ACIDIC RIBOSOMAL PROTEIN P1Interproscan
PTHR12962CALCIUM-REGULATED HEAT STABLE PROTEIN CRHSP-24-RELATEDInterproscan
PTHR18884SEPTINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016573Biological Processobsolete histone acetylationInterproscan
GO:0044545Cellular ComponentNSL complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016485Biological Processprotein processingInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006414Biological Processtranslational elongationInterproscan
GO:0002181Biological Processcytoplasmic translationInterproscan
GO:0022625Cellular Componentcytosolic large ribosomal subunitInterproscan
GO:0030295Molecular Functionprotein kinase activator activityInterproscan
GO:0043021Molecular Functionribonucleoprotein complex bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0043488Biological Processregulation of mRNA stabilityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005940Cellular Componentseptin ringInterproscan
GO:0015630Cellular Componentmicrotubule cytoskeletonInterproscan
GO:0031105Cellular Componentseptin complexInterproscan
GO:0032153Cellular Componentcell division siteInterproscan
GO:0034613Biological Processprotein localizationInterproscan
GO:0060090Molecular Functionmolecular adaptor activityInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0061640Biological Processcytoskeleton-dependent cytokinesisInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02942RP-LP1, RPLP1; large subunit ribosomal protein LP1-Ribosomeko03011deepkoala

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