Detailed information of g43.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBK67582.1, beta-ketoacyl-[acyl-carrier-protein] synthase I [Rickettsiales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q02K943-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=fabB PE=1 SV=1
P437103-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=fabB PE=3 SV=1
P0A9543-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=fabB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF18336Tudor_FRX1Fragile X messenger ribonucleoprotein 1, Tudor domainDomainInterproscan
PF02801Ketoacyl-synt_CBeta-ketoacyl synthase, C-terminal domainDomainInterproscan
PF00109ketoacyl-syntBeta-ketoacyl synthase, N-terminal domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan
PF00856SETSET domainFamilyInterproscan
PF05965FYRCF/Y rich C-terminusFamilyInterproscan
PF08240ADH_NAlcohol dehydrogenase GroES-like domainDomainInterproscan
PF13602ADH_zinc_N_2Zinc-binding dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR041560DomainFMR1, tudor domainInterproscan
IPR016039Homologous_superfamilyThiolase-likeInterproscan
IPR014031DomainBeta-ketoacyl synthase, C-terminalInterproscan
IPR020841DomainPolyketide synthase, beta-ketoacyl synthase domainInterproscan
IPR014030DomainBeta-ketoacyl synthase, N-terminalInterproscan
IPR000794FamilyBeta-ketoacyl synthaseInterproscan
IPR018201Active_siteBeta-ketoacyl synthase, active siteInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR039477DomainILEI/PANDER domainInterproscan
IPR003656DomainZinc finger, BED-typeInterproscan
IPR001214DomainSET domainInterproscan
IPR047219DomainHistone-lysine N-methyltransferase 2A/2B, SET domainInterproscan
IPR003889Conserved_siteFY-rich, C-terminalInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR003616DomainPost-SET domainInterproscan
IPR013154DomainAlcohol dehydrogenase-like, N-terminalInterproscan
IPR020843DomainPolyketide synthase, enoylreductase domainInterproscan
IPR011032Homologous_superfamilyGroES-like superfamilyInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR051397FamilyZinc-containing alcohol dehydrogenase-like proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22955RETROTRANSPOSONInterproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR11712POLYKETIDE SYNTHASE-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47501TRANSPOSASE-RELATEDInterproscan
PTHR45838HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBERInterproscan
PTHR43677SHORT-CHAIN DEHYDROGENASE/REDUCTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan
GO:0004315Molecular Function3-oxoacyl-[acyl-carrier-protein] synthase activityInterproscan
GO:0006633Biological Processfatty acid biosynthetic processInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0035097Cellular Componenthistone methyltransferase complexInterproscan
GO:0042800Molecular Functionhistone H3K4 methyltransferase activityInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0051568Biological Processobsolete histone H3-K4 methylationInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00647fabB; 3-oxoacyl-[acyl-carrier-protein] synthase IEC:2.3.1.41
Lipid biosynthesis proteinsko01004deepkoala

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