Gene detail

Detailed information of g4359.t1.1 in Haliclystus octoradiatus

Genomic Location: not available for this species
NR annotation: XP_020901921.1, DC-STAMP domain-containing protein 2 isoform X2 [Exaiptasia diaphana]
Species abbreviation HOCTO · all data for this species · gene families

Sequence

CDS

g4359.t1

ATGCTTGGTAAATATTATACAGTTTTAAAAGACTTTACTCCAAATGCTGAGGAGATAAAAGCTGAAATTTTGCCTTTGGAAAAAGGCGATATTGTTGTGGATGTGGAAGAAATAGATCCGGAATGGGTTATGGGACGAAATATGCTGTCGCAGGAATCAGGCAAAATAATGAGAAGTTATTTAGTAGAATTCAACGGTGCAGAACTAAATCAAGACAGTGAGATAAAAGCTGATGAAATAAAAACTGAAAGCGAAGAAAAGAATATTCAGCTAACGGTTAATCCTTTGTCAAACACCGAAGATGGAATAGCGAAATCTGGGGGTAGTAATAACACCGGTGTCGTGATAGGCGTCAAATTAGGTTGCGACGAAGGTTATAATAGCGGTAATAGTTGTTCAAATGATAGCGGTGAAAGAATAACATTTACACAAACACAACCGACGGTTATTGAAGATAAAATTGTAGAATTACCACAACGAACGCCGCGTGAAAAACGTGTAAAACGCACCGAAAGTTTTCAAGATGAAGACGGCTATGAAATACCTATTCTATCACAAACAACAGAACTATTACCTGATGATGGTAAAATGGCAACAACAAGTTTAACAAGAAACTCTAGTCTGTTATCAAATGATAAAACATCTGTTTTATGTCGTAAACCTTCGAGCGGCTCAAGAAATGAGACAACAGACCGCCTGCGTACTAAATCCTCAACGGCTGGCAGTGAATCATGCACAGACTGTAATCCCACATCTAATTCAAGAACAGATTACTTTCGTGCAACAGCTTCGCCtgataatattgaatttacaacATTACACCgtactaaaataatattatgctTAATCATAAGCATTTTAGTTGCAATCGGCAGTTTTATAATCTGGATTTTAGCGTTTCATTTGCCGCCTATATTTAGCCTGTGTTTATCCttgattgttttcattgtaCTTTTGGTTACAccatttattatttgcaatggAAAGATAGTTTGTGTTTTATTACTTATATTACCAAGCATGTGTTCTCGGTTATTTAAATTTGGTATTTTGATAGTGATTTCACtacttattattattggaCCAGCTTATAACTCTGCAGGCAATCTGACAACGATGTTAAACTGTCAAACGTCacaaattcattcaaattcaaatgagACTGTTAATTATACTGCACAAGCTATccatttgtttacaaataatGGGTTGAATTCGTCTGAATTAGATCATTTACGTGATTTTTATTCGTATTGTACATTATCACTTGAAACACTTCATGATATGTGTGATGTTGTAGAAAGAGAATTAACCTTTAAATGTTTACAGTTGAATAAAACAGATAATACATCATCGCCAGGCAACCATCGATGTCGTTACAAAATCTGTGATAAATCTAATCGGATTGCAAAACAGTGTGAACAAATAATGGATTATAATCGTCATGAAGAAAAATCCGATTCAAAATGGCAGACTGGAATCCGATCGgttattattcaattaatgCCTTTACTTGTATTACTCATATTATATGAATCACATTCATATCATCGACTGTATCTTACTAATAAATCATATGACAATGTTTACATAACAAGAAAACTCAAAGTGATTGATTGTGAACGAAGTAAACGCGGTTTAACAAATAATCTCTTTCCGTTCAGTAAGGCCGAATTCCGTCAATATATTCTGCCTTCATCTTTCGGATTTACAAATGCCGAATTAAAGAATTCATTTTCTTGGGTTTTAATATGGTgtgttatttgttttattgcaCTCTGTGGTATTAATttagataaaaatatttatgatgCCATGAAAAATGTATCTGAGAGGTATGACCAATGCCAAGATGATCTTGAATCACCACAAATGAATATACGTATTGCCATTTATAGTATGTTGGGTGTTTATTTtggtataataatattatcatgtCATATATTACGTCTTCGTAGTAGAATATGTGCAATGTTTTATACTAAACGTGAAATTAAACGTATTATGTATctatattatatgatattaGATGAACGTGAACAATTTTGGGGTGTACATCGACGTAAAGTACAATTATTAGCTGAGGCACGAAGACTTAATGCTAAATATGACATTTTGTTACATATACACGGTAGCATACCAACTATTATGCAACGTGCTTGGGAGAAATTTAGTATTCAACGTTGCATGGTATGTCGTTCATTAACAATGAAACGTTGTTTTGTTTGTATGGATACTGAATGTAACGCCGTCTTTTGTTATGGTTGTTACGTCGACGCTGGTGGTTGTTGCGTTGCTTGTAAACAATTAACCAATAACAGTTCATCGCCTTGCTGTGAATATGTAGAAACGAGAtga

Transcript

g4359.t1

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009043 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07782 all species →	DC_STAMP	DC-STAMP-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR012858 all species →	Domain	Dendritic cell-specific transmembrane protein-like	Interproscan
IPR051856 all species →	Family	Cell Surface Receptor and E3 Ligase Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21041 all species →	DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g4359.t1.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.