Detailed information of g44.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBT3991248.1, YifB family Mg chelatase-like AAA ATPase [Rhodospirillaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P45049Competence protein ComM OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=comM PE=1 SV=1
P57015Uncharacterized protein YifB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=yifB PE=3 SV=1
P22787Uncharacterized protein YifB OS=Escherichia coli (strain K12) OX=83333 GN=yifB PE=3 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04832SOULSOUL heme-binding proteinFamilyInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF13335Mg_chelatase_CMagnesium chelatase, subunit ChlI C-terminalFamilyInterproscan
PF01078Mg_chelataseMagnesium chelatase, subunit ChlIDomainInterproscan
PF13541ChlISubunit ChlI of Mg-chelataseDomainInterproscan
PF00635Motile_SpermMSP (Major sperm protein) domainDomainInterproscan
PF02791DDTDDT domainFamilyInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF15613WSDWilliams-Beuren syndrome DDT (WSD), D-TOX E motifFamilyInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006917FamilySOUL haem-binding proteinInterproscan
IPR011256Homologous_superfamilyRegulatory factor, effector binding domain superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR025158DomainMg chelatase-related protein, C-terminal domainInterproscan
IPR014721Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan
IPR000523DomainMagnesium chelatase ChlI-like, catalytic domainInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR045006FamilyMagnesium-chelatase subunit ChlI-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR004482FamilyMg chelatase-related proteinInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR016763FamilyVesicle-associated membrane-protein-associated proteinInterproscan
IPR000535DomainMajor sperm protein (MSP) domainInterproscan
IPR008962Homologous_superfamilyPapD-like superfamilyInterproscan
IPR051014FamilyCation Transport ATPase Type IBInterproscan
IPR036163Homologous_superfamilyHeavy metal-associated domain superfamilyInterproscan
IPR006121DomainHeavy metal-associated domain, HMAInterproscan
IPR018501DomainDDT domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR028941DomainWHIM2 domainInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR038028FamilyNucleosome-remodeling factor subunit BPTFInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11220HEME-BINDING PROTEIN-RELATEDInterproscan
PTHR32039MAGNESIUM-CHELATASE SUBUNIT CHLIInterproscan
PTHR10809VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEINInterproscan
PTHR12011ADHESION G-PROTEIN COUPLED RECEPTORInterproscan
PTHR48085CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATEDInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR45975NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTFInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0033149Molecular FunctionFFAT motif bindingInterproscan
GO:0061817Biological Processendoplasmic reticulum-plasma membrane tetheringInterproscan
GO:0090158Biological Processendoplasmic reticulum membrane organizationInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007189Biological Processadenylate cyclase-activating G protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016589Cellular ComponentNURF complexInterproscan
GO:0035064Molecular Functionmethylated histone bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07391comM; magnesium chelatase family protein-Protein processing-deepkoala

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