Gene detail

Detailed information of g4476.t1 in Tripedalia maipoensis

Genomic Location: scaffold_17:4528963...4530192
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00782 all species →	DSPc	Dual specificity phosphatase, catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016130 all species →	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR000340 all species →	Domain	Dual specificity phosphatase, catalytic domain	Interproscan
IPR029021 all species →	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR036873 all species →	Homologous_superfamily	Rhodanese-like domain superfamily	Interproscan
IPR020422 all species →	Domain	Dual specificity protein phosphatase domain	Interproscan
IPR001763 all species →	Domain	Rhodanese-like domain	Interproscan
IPR000387 all species →	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR053272 all species →	Family	Serine/threonine/tyrosine-interacting-like protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46659 all species →	SERINE/THREONINE/TYROSINE-INTERACTING-LIKE PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016311 all species →	Biological Process	dephosphorylation	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan
GO:0001691 all species →	Molecular Function	pseudophosphatase activity	Interproscan
GO:0004864 all species →	Molecular Function	protein phosphatase inhibitor activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0019903 all species →	Molecular Function	protein phosphatase binding	Interproscan
GO:0062030 all species →	Biological Process	negative regulation of stress granule assembly	Interproscan
GO:2001244 all species →	Biological Process	positive regulation of intrinsic apoptotic signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g4476.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.