Gene detail

Detailed information of g4479.t2 in Acropora digitifera

Genomic Location: chr2Alt:28154183...28198571
NR annotation: XP_029196503.2, protein unc-13 homolog A-like isoform X2 [Acropora millepora]
Species abbreviation ADIGI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g4479.t2

ATGTCGATTTTGTGTGTATTAGTGAAGAAAGGAAAACTTAAAGGCAACCCAGAAAAGCTGAGCACTTTTGTTCGAGTAATTCTTCATAATGTCACCCTGGAGACAGAGGTGGATAAGGGCGACTCACCAACATGGGATGAGGAGTTTGTCTTTGAAACAAACCAACTGGACCAAGCAGTATGTTTTCAACTGTGGGAGAAAGGATTCTTTAAGGACAATCTGCTGGGAAGTGCCAGGATTCCTTTGATGCAAATAAATCATTCAAATGTCGATGGAGGTGGAGCCTGGGTACAGCTGAGCCATGAGACCTCTAAAGGACTTGTTTCGGCAGGACATCTGTTACTGGTTGACAGTCGGTTTGAGCTACCATCAGGGCTCACAGAGGAGGAAGCATTAGCTCTTCAAAACAAACTTGAAGCTTTTTATACCATAATGAATCATGAAATGGAAGTTTTGAAGGAGCAATCAAAGAAAGCGAAAAGAGAAAAAGACCACATTGGAAGTGAAGAAATAGACAGTGAGTACACAGTTGATGCTGCCCTCTACAATCCTTTCTTGGATTCAGATCAGGAATTGAATGATCTAGAGTCTGATGATGAAGTTGATGGACAGATTAGTGAAAGTGAAGCAGACAGGGTCAGAATAAATTACACAGAACATTTTGATGGAAGCATAGGACAAACTAATGAGGACATTTGTGAGGAGCTCTATGAAAATGAGATGGAAAATGAACTGTCTGTTTTGCCTGAGAGTCAACAAGGGGAAGAAGAATTCAAGGAATCATACAGAGTAACTTTTGCGGAACCAACAGAGGCTGCAGAGAGCGCTGTGATCCTTCATGATACTATTACAGTGACTAATCACATTGAGGACTTTGCTGAGGTGGAGCACCTTGAAGAAGGTAGTGATGATGATGATGACATAAAAAGAGATGGGCCTCTGAAACGACAGGGAGGGATCAGAGTATCTGCTGGGACATTTCGCAAGTCCTTATGGAATGAAAAGAACAAAGCGCTTCTTAACTCAAATGATGAACCAAGTTCTTTGATGATAAGGAGAAGGTCCTCGATTCCTTTTAATATAAATCAAGCTTCCCACTCACAAGGAGGAGTAAGGAAACCTCAGCTATTGATGTCGCAGAGAGCACATTTAAATGATGAGGAACTGAAACTCCATGTTTATAAAAAGACATTACAAGCACTCATTTACCCTATTTCAGATACCACTCCTCATAAATTTGAGATCTGGTCAACACAAGTTCCTGCTTACTGTTATGAATGTGAAGGTCTTCTGTGGGGTTTGGCCAGACAAGGTTTGAAATGCAAAGAATGTGGAGTGAAGTGTCATGAGAGATGTAAAGACCTGTTAAATGCAGATTGTTTGCAGCGTGCTGCCAAGAAATCAGCCAAACATGGTACAGCTGACAAAACACAATCCATCATTGTTTCTATGAAGAACAGAATGGAAAATAGAGCTTCGGAAAGGCCTGAAATATTTCAACAAATTAGTGAGGTGTTTCACATGATGCCCAAAACACATGCAGGGCACATGATGGCCATAAAAAATTTGATCTTGGAAGGAACATCAAAATGGTCAGCAAAAATACTTATCACAGTTGTGAGTGCACAAGGGTTAATTGCCAAAGATAAAGGAGGTACAAGTGATCCTTATGTTACAGTACAGATTGGCAGAACAAAGAAAAGAACAAAGACTATTCTACATGAGCTGAATCCAGAGTGGAATGAAACATTTGGATTTGATTGCCACAATTCATCTGACAGAATTAAAGTGCGTGTGTGGGATGAAGATGATGACATGAAGGCCATGATTAGATCCAGGCTGACCAGAGAGCGTGATGACTTCCTTGGCCAAACAATCATTGAAGTATGCACCCTAAGTGGAGAGATGGATGTTTGGTACAACCTTGAGAAAAGAACTGACAAATCTGCTGTGTCTGGAGCAATTAGACTGAGAATCAGTATTGAGATAAAAGGAGAAGAAAGACTTGTTCCTTACCATCAGCAGTATACTTGTCTCCATGAGAATATCTTTCACTCCTTGTGTGAGAATAACAACGAGCAGGTCCCAATTCCTACTGCAAATTCAAGAGAGGATCCTTGGAAGGTATTTTTCCCTGAACCTGCTCTTGAGATAGTGAATGAGTTTGCCATGAGATATGGAATTGAAAGCATCTATCAAGCTATGACACACCTGTCCTGCCTTACATCATACTACATGTGTCCAGGTGTACCTACTGTGATCAGCAGCCTACTTGCAAATATCAATGCTTTCTTTTCACACACAACTGCAAACTCAGCCACATCTGCGTCTCATCGCTTTACATCCACCAATTTTGGGAGTGAAAAGTTTGTGAAGATTGTGGATCATTTGTACAACACATTGAGGATTGACATAGCAAATTATAGGACTAATTTTCCAGCAGCAAATAGTGACAAGTTGGAAGACCTTAAATCATGTGTTGACTTGCTGACCAGCGTCACATTTTTCCGAATGAAGGTTCTCAGTCTGCGACCCACGAGAACTGCAGAGATTGTGAGGGAATGTGTTAAGAATTGCATGAAGGCTAGCTATTCATATCTCTATGCCAACTGTTCTGAGCTGTATGACCGAGAACTGGCTTCAGAAAGCAACCTAGCTGCGCCAAACATGCCACCATCTGGTCCAAAGAATGTGGAGTTTTGGCCAAAGCTTATCTCCTTGGTCGTAACTGTGATTGAAGAAGATAAAGGCATCTATACCCACGTTCTAAATCAGTTTCCAACAGAGCTTAATGTTGGTGAGATCAGTGCCCAAGTGTTTTGGAACTTGTTCTCAACAGACCTACATGAAATTTTAAATGAGCACCGTTCAAATCAACATTGTCGTTGGAATAGTACTGATTACATGAACCTCCATTTTAAGGTGAAGTGGTTTTATAACGAGTATGCAAGTGAATGTCCTGAAAACAAGGATCAAGTTCCTGAATATGCCAGTTGGTTTGAGCCATTTGTTTCCCAGTGGTTGACTGAGAATGATGAGGTTTCAACAGAATTTATGATTGGTGCACTGGAACGTGACAAGAAGTATGGGTTTCCATCTAGCTCTCCTCACTCTGTGTTCTCCAACTCTGTGGTTGACATCTTTTGCTCCTTGAATCAGAGCTTTGAGATTGTTCGAAAACTTGATTGCCCAGACCCAGAAATTCAGGCTGTTTACATGATCAAATTTACAATGACTGTCCAAAATGTGTTACTTCAGTATGCTGAAAAAATTGTGAACGAATTTGATGTTTGGTGTCAAGAAGGGAAAACTGCTTGCATTTTGATGAACAACATCCAGCAGCTACGGGTTCAACTGGAAAAGCTTTATGAAACAATGGGTGGAGGAGAAAAGCTTTCTCCAGAATGCAGTGAGGTATTCAAAGAACTCCAAGTGAAACTTAATCTCACTCTTGATGAACTTTGTGTCATCTTTGCCAGAAGCTTGGATTCAGATATTCATGATAGTGTAGAAGTTGTTGCTAACCTCTTGTTCAAGATCAAAAGCACTGGTAACTTCAACCCTGCTTTGCAAAGTAGTAAAAACACAATCCAACAAGAATCAGAAGAAATGCTTCAGTCATTACTGTGTACAACTTTGGAGGGAAGGTTGGAAGTTTTTCACAATGCTTGTGAAAAAACTGTGCTAAAAAGACTTCTTAAGGAACTGTGGAAGTTGACCTTACAGAATATTGAAAAAGTAATAGTTCTGCCACCTCTGGTGGACATCAAGGAGATCGGAGGAATAACCAGTCAATTTGATTCACGAAACATGAGCTTGAAGCAGTGTGCTGTGTTAGAAAATGCTCTTTTAAGAATAAAGGAGTACTTTCATGCTTCTGGCAGTGGACTGAAGAAGGGGTTCTTGGACAAATGTCCCCAGTTACAATCACTCAAGTCAGCTCTGTACCTTTACACGCAGACAACCGACTCACTTATCAAAGAATTTGTCAAGAGCCAAATGTCGCAGGAGGATCCAGGTGTTGATAACCCAGTAGGGGAGGTGTTAGTGCAGGTTGACCTTTTCACCCACCCTGGTACAGGAGAGCACAAAGTTACTGTTAAAGTTGTTGCTGCAAAGGATTTGATTTGGCAGTCATCTGGAATGTTTCGTCCATTTGTTGAAGTTAACATTGTGGGACCAAATCTCAATGGAAAGAGACGTAAATACTCCACAAAGTCAAAGAACAACAACTGGTCACCTAATTATAATGAAACAGCATGCTTTGTTCTTGGTAATGAAGATGTTCTGGATAACTATGAACTTCACATTTGTGTAAAGGATTACTGCTTTGCTCGCACAGACAACCTTGTTGGGATGACTGTCCTTCATTTGAAGAACATGGGCTCTTATGCATGTTCTTCTGCTCTTGGTCGGTACATTCAAATGGACAGTAAAGGCTGGACAATTTTGAAGATTCTCTCTCAGAGAGTCAGTGATGAAGTTGCAAGAGAGTTTGTATTTCTCAAAAGCACCAGACGTTCAGAGACAGTCTGA

Transcript

chr2Alt.g4479.t2

GTTCTGCATGCACATGCACTGGTACCGCAGCTCCACCTACACCCCCTTAGAAATAGCACTTGACTGTATCATTCAGAAAGTATTGACGTCATTACCCATCAGTTGTTCACTTCTTGTGGTGTTCGTAGAGAGAATGCATTGACATTATGTCCGAGAAAAACAAAAAAGGGATTACGAAAGACGAAAAATAGAAAAATAACCTGAAGTTGAGCTATGTCGATTTTGTGTGTATTAGTGAAGAAAGGAAAACTTAAAGGCAACCCAGAAAAGCTGAGCACTTTTGTTCGAGTAATTCTTCATAATGTCACCCTGGAGACAGAGGTGGATAAGGGCGACTCACCAACATGGGATGAGGAGTTTGTCTTTGAAACAAACCAACTGGACCAAGCAGTATGTTTTCAACTGTGGGAGAAAGGATTCTTTAAGGACAATCTGCTGGGAAGTGCCAGGATTCCTTTGATGCAAATAAATCATTCAAATGTCGATGGAGGTGGAGCCTGGGTACAGCTGAGCCATGAGACCTCTAAAGGACTTGTTTCGGCAGGACATCTGTTACTGGTTGACAGTCGGTTTGAGCTACCATCAGGGCTCACAGAGGAGGAAGCATTAGCTCTTCAAAACAAACTTGAAGCTTTTTATACCATAATGAATCATGAAATGGAAGTTTTGAAGGAGCAATCAAAGAAAGCGAAAAGAGAAAAAGACCACATTGGAAGTGAAGAAATAGACAGTGAGTACACAGTTGATGCTGCCCTCTACAATCCTTTCTTGGATTCAGATCAGGAATTGAATGATCTAGAGTCTGATGATGAAGTTGATGGACAGATTAGTGAAAGTGAAGCAGACAGGGTCAGAATAAATTACACAGAACATTTTGATGGAAGCATAGGACAAACTAATGAGGACATTTGTGAGGAGCTCTATGAAAATGAGATGGAAAATGAACTGTCTGTTTTGCCTGAGAGTCAACAAGGGGAAGAAGAATTCAAGGAATCATACAGAGTAACTTTTGCGGAACCAACAGAGGCTGCAGAGAGCGCTGTGATCCTTCATGATACTATTACAGTGACTAATCACATTGAGGACTTTGCTGAGGTGGAGCACCTTGAAGAAGGTAGTGATGATGATGATGACATAAAAAGAGATGGGCCTCTGAAACGACAGGGAGGGATCAGAGTATCTGCTGGGACATTTCGCAAGTCCTTATGGAATGAAAAGAACAAAGCGCTTCTTAACTCAAATGATGAACCAAGTTCTTTGATGATAAGGAGAAGGTCCTCGATTCCTTTTAATATAAATCAAGCTTCCCACTCACAAGGAGGAGTAAGGAAACCTCAGCTATTGATGTCGCAGAGAGCACATTTAAATGATGAGGAACTGAAACTCCATGTTTATAAAAAGACATTACAAGCACTCATTTACCCTATTTCAGATACCACTCCTCATAAATTTGAGATCTGGTCAACACAAGTTCCTGCTTACTGTTATGAATGTGAAGGTCTTCTGTGGGGTTTGGCCAGACAAGGTTTGAAATGCAAAGAATGTGGAGTGAAGTGTCATGAGAGATGTAAAGACCTGTTAAATGCAGATTGTTTGCAGCGTGCTGCCAAGAAATCAGCCAAACATGGTACAGCTGACAAAACACAATCCATCATTGTTTCTATGAAGAACAGAATGGAAAATAGAGCTTCGGAAAGGCCTGAAATATTTCAACAAATTAGTGAGGTGTTTCACATGATGCCCAAAACACATGCAGGGCACATGATGGCCATAAAAAATTTGATCTTGGAAGGAACATCAAAATGGTCAGCAAAAATACTTATCACAGTTGTGAGTGCACAAGGGTTAATTGCCAAAGATAAAGGAGGTACAAGTGATCCTTATGTTACAGTACAGATTGGCAGAACAAAGAAAAGAACAAAGACTATTCTACATGAGCTGAATCCAGAGTGGAATGAAACATTTGGATTTGATTGCCACAATTCATCTGACAGAATTAAAGTGCGTGTGTGGGATGAAGATGATGACATGAAGGCCATGATTAGATCCAGGCTGACCAGAGAGCGTGATGACTTCCTTGGCCAAACAATCATTGAAGTATGCACCCTAAGTGGAGAGATGGATGTTTGGTACAACCTTGAGAAAAGAACTGACAAATCTGCTGTGTCTGGAGCAATTAGACTGAGAATCAGTATTGAGATAAAAGGAGAAGAAAGACTTGTTCCTTACCATCAGCAGTATACTTGTCTCCATGAGAATATCTTTCACTCCTTGTGTGAGAATAACAACGAGCAGGTCCCAATTCCTACTGCAAATTCAAGAGAGGATCCTTGGAAGGTATTTTTCCCTGAACCTGCTCTTGAGATAGTGAATGAGTTTGCCATGAGATATGGAATTGAAAGCATCTATCAAGCTATGACACACCTGTCCTGCCTTACATCATACTACATGTGTCCAGGTGTACCTACTGTGATCAGCAGCCTACTTGCAAATATCAATGCTTTCTTTTCACACACAACTGCAAACTCAGCCACATCTGCGTCTCATCGCTTTACATCCACCAATTTTGGGAGTGAAAAGTTTGTGAAGATTGTGGATCATTTGTACAACACATTGAGGATTGACATAGCAAATTATAGGACTAATTTTCCAGCAGCAAATAGTGACAAGTTGGAAGACCTTAAATCATGTGTTGACTTGCTGACCAGCGTCACATTTTTCCGAATGAAGGTTCTCAGTCTGCGACCCACGAGAACTGCAGAGATTGTGAGGGAATGTGTTAAGAATTGCATGAAGGCTAGCTATTCATATCTCTATGCCAACTGTTCTGAGCTGTATGACCGAGAACTGGCTTCAGAAAGCAACCTAGCTGCGCCAAACATGCCACCATCTGGTCCAAAGAATGTGGAGTTTTGGCCAAAGCTTATCTCCTTGGTCGTAACTGTGATTGAAGAAGATAAAGGCATCTATACCCACGTTCTAAATCAGTTTCCAACAGAGCTTAATGTTGGTGAGATCAGTGCCCAAGTGTTTTGGAACTTGTTCTCAACAGACCTACATGAAATTTTAAATGAGCACCGTTCAAATCAACATTGTCGTTGGAATAGTACTGATTACATGAACCTCCATTTTAAGGTGAAGTGGTTTTATAACGAGTATGCAAGTGAATGTCCTGAAAACAAGGATCAAGTTCCTGAATATGCCAGTTGGTTTGAGCCATTTGTTTCCCAGTGGTTGACTGAGAATGATGAGGTTTCAACAGAATTTATGATTGGTGCACTGGAACGTGACAAGAAGTATGGGTTTCCATCTAGCTCTCCTCACTCTGTGTTCTCCAACTCTGTGGTTGACATCTTTTGCTCCTTGAATCAGAGCTTTGAGATTGTTCGAAAACTTGATTGCCCAGACCCAGAAATTCAGGCTGTTTACATGATCAAATTTACAATGACTGTCCAAAATGTGTTACTTCAGTATGCTGAAAAAATTGTGAACGAATTTGATGTTTGGTGTCAAGAAGGGAAAACTGCTTGCATTTTGATGAACAACATCCAGCAGCTACGGGTTCAACTGGAAAAGCTTTATGAAACAATGGGTGGAGGAGAAAAGCTTTCTCCAGAATGCAGTGAGGTATTCAAAGAACTCCAAGTGAAACTTAATCTCACTCTTGATGAACTTTGTGTCATCTTTGCCAGAAGCTTGGATTCAGATATTCATGATAGTGTAGAAGTTGTTGCTAACCTCTTGTTCAAGATCAAAAGCACTGGTAACTTCAACCCTGCTTTGCAAAGTAGTAAAAACACAATCCAACAAGAATCAGAAGAAATGCTTCAGTCATTACTGTGTACAACTTTGGAGGGAAGGTTGGAAGTTTTTCACAATGCTTGTGAAAAAACTGTGCTAAAAAGACTTCTTAAGGAACTGTGGAAGTTGACCTTACAGAATATTGAAAAAGTAATAGTTCTGCCACCTCTGGTGGACATCAAGGAGATCGGAGGAATAACCAGTCAATTTGATTCACGAAACATGAGCTTGAAGCAGTGTGCTGTGTTAGAAAATGCTCTTTTAAGAATAAAGGAGTACTTTCATGCTTCTGGCAGTGGACTGAAGAAGGGGTTCTTGGACAAATGTCCCCAGTTACAATCACTCAAGTCAGCTCTGTACCTTTACACGCAGACAACCGACTCACTTATCAAAGAATTTGTCAAGAGCCAAATGTCGCAGGAGGATCCAGGTGTTGATAACCCAGTAGGGGAGGTGTTAGTGCAGGTTGACCTTTTCACCCACCCTGGTACAGGAGAGCACAAAGTTACTGTTAAAGTTGTTGCTGCAAAGGATTTGATTTGGCAGTCATCTGGAATGTTTCGTCCATTTGTTGAAGTTAACATTGTGGGACCAAATCTCAATGGAAAGAGACGTAAATACTCCACAAAGTCAAAGAACAACAACTGGTCACCTAATTATAATGAAACAGCATGCTTTGTTCTTGGTAATGAAGATGTTCTGGATAACTATGAACTTCACATTTGTGTAAAGGATTACTGCTTTGCTCGCACAGACAACCTTGTTGGGATGACTGTCCTTCATTTGAAGAACATGGGCTCTTATGCATGTTCTTCTGCTCTTGGTCGGTACATTCAAATGGACAGTAAAGGCTGGACAATTTTGAAGATTCTCTCTCAGAGAGTCAGTGATGAAGTTGCAAGAGAGTTTGTATTTCTCAAAAGCACCAGACGTTCAGAGACAGTCTGAGGAATTGCTTTAGCTACAACTGTGTAATAGTCAAGGGGCAATGTTGTAATCGAGTGTTTTCATGTCTATTTAATTAGTAGCACAATAGTATGTTTAGCAAAGTGAAAGATGAACTGAATGCCTTTTGTAGAACAAGAAGTTTTTAAAATGAGCAAGTGTCATCTTTGTTTCTATCTGGCAGACTAAAACCTTCTTTTATGG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O14795	Protein unc-13 homolog B OS=Homo sapiens OX=9606 GN=UNC13B PE=1 SV=2
Q9Z1N9	Protein unc-13 homolog B OS=Mus musculus OX=10090 GN=Unc13b PE=1 SV=2
Q62769	Protein unc-13 homolog B OS=Rattus norvegicus OX=10116 GN=Unc13b PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06292 all species →	MUN	MUN domain	Repeat	Interproscan
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF00130 all species →	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010439 all species →	Domain	MUN domain	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR002219 all species →	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR014770 all species →	Domain	Munc13 homology 1	Interproscan
IPR014772 all species →	Domain	Mammalian uncoordinated homology 13, domain 2	Interproscan
IPR046349 all species →	Homologous_superfamily	C1-like domain superfamily	Interproscan
IPR027080 all species →	Family	Protein Unc-13	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10480 all species →	PROTEIN UNC-13 HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007268 all species →	Biological Process	chemical synaptic transmission	Interproscan
GO:0007528 all species →	Biological Process	neuromuscular junction development	Interproscan
GO:0016081 all species →	Biological Process	synaptic vesicle docking	Interproscan
GO:0016082 all species →	Biological Process	synaptic vesicle priming	Interproscan
GO:0016188 all species →	Biological Process	synaptic vesicle maturation	Interproscan
GO:0017075 all species →	Molecular Function	syntaxin-1 binding	Interproscan
GO:0019992 all species →	Molecular Function	diacylglycerol binding	Interproscan
GO:0030672 all species →	Cellular Component	synaptic vesicle membrane	Interproscan
GO:0031594 all species →	Cellular Component	neuromuscular junction	Interproscan
GO:0035249 all species →	Biological Process	synaptic transmission, glutamatergic	Interproscan
GO:0042734 all species →	Cellular Component	presynaptic membrane	Interproscan
GO:0043195 all species →	Cellular Component	terminal bouton	Interproscan
GO:0061789 all species →	Biological Process	dense core granule priming	Interproscan
GO:0098831 all species →	Cellular Component	presynaptic active zone cytoplasmic component	Interproscan
GO:0099525 all species →	Biological Process	presynaptic dense core vesicle exocytosis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15293	UNC13A_B_C, MUNC13; protein unc-13 A/B/C	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.