Detailed information of g45.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: NBX03364.1, 3-phosphoshikimate 1-carboxyvinyltransferase [Alphaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A7HPE13-phosphoshikimate 1-carboxyvinyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) OX=402881 GN=aroA PE=3 SV=1
Q28UI73-phosphoshikimate 1-carboxyvinyltransferase OS=Jannaschia sp. (strain CCS1) OX=290400 GN=aroA PE=3 SV=1
Q161H23-phosphoshikimate 1-carboxyvinyltransferase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) OX=375451 GN=aroA PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02224Cytidylate_kinCytidylate kinaseDomainInterproscan
PF00275EPSP_synthaseEPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)FamilyInterproscan
PF01039Carboxyl_transCarboxyl transferase domainFamilyInterproscan
PF00917MATHMATH domainDomainInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF00089TrypsinTrypsinDomainInterproscan
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023193Conserved_site3-phosphoshikimate 1-carboxyvinyltransferase, conserved siteInterproscan
IPR006264Family3-phosphoshikimate 1-carboxyvinyltransferaseInterproscan
IPR036968Homologous_superfamilyEnolpyruvate transferase domain superfamilyInterproscan
IPR013792Homologous_superfamilyRNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/betaInterproscan
IPR011994DomainCytidylate kinase domainInterproscan
IPR001986DomainEnolpyruvate transferase domainInterproscan
IPR003136FamilyCytidylate kinaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR011762DomainAcetyl-coenzyme A carboxyltransferase, N-terminalInterproscan
IPR011763DomainAcetyl-coenzyme A carboxyltransferase, C-terminalInterproscan
IPR029045Homologous_superfamilyClpP/crotonase-like domain superfamilyInterproscan
IPR051047FamilyAcyl-CoA Carboxylase Beta SubunitInterproscan
IPR034733DomainAcetyl-coenzyme A carboxylase carboxyl transferase subunit betaInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR002083DomainMATH/TRAF domainInterproscan
IPR008974Homologous_superfamilyTRAF-likeInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR050164FamilyUbiquitin carboxyl-terminal hydrolasesInterproscan
IPR053061FamilyAN1-type zinc finger domain-containing proteinInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR039477DomainILEI/PANDER domainInterproscan
IPR001314FamilyPeptidase S1A, chymotrypsin familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21090AROM/DEHYDROQUINATE SYNTHASEInterproscan
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan
PTHR43842PROPIONYL-COA CARBOXYLASE BETA CHAINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan
PTHR46728AN1-TYPE ZINC FINGER PROTEIN 4Interproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR24252ACROSIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003866Molecular Function3-phosphoshikimate 1-carboxyvinyltransferase activityInterproscan
GO:0009073Biological Processaromatic amino acid family biosynthetic processInterproscan
GO:0016765Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groupsInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004127Molecular Function(d)CMP kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0009423Biological Processchorismate biosynthetic processInterproscan
GO:0016874Molecular Functionligase activityInterproscan
GO:0004658Molecular Functionpropionyl-CoA carboxylase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0031647Biological Processregulation of protein stabilityInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01966PCCB, pccB; propionyl-CoA carboxylase beta subunitEC:6.4.1.3
EC:2.1.3.15
Phenylalanine, tyrosine and tryptophan biosynthesisko00400deepkoala
Valine, leucine and isoleucine degradationko00280deepkoala

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