Gene detail

Detailed information of g453.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH1250533.1, Hypp8867 [Branchiostoma lanceolatum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q9UBU6	Protein FAM8A1 OS=Homo sapiens OX=9606 GN=FAM8A1 PE=1 SV=1
Q6DC66	Bcl-2-related ovarian killer protein homolog A OS=Danio rerio OX=7955 GN=boka PE=2 SV=1
Q9I8I2	Bcl-2-related ovarian killer protein OS=Gallus gallus OX=9031 GN=BOK PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_PIM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF06271	RDD	RDD family	Family	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00169	PH	PH domain	Domain	Interproscan
PF00514	Arm	Armadillo/beta-catenin-like repeat	Repeat	Interproscan
PF00452	Bcl-2	Apoptosis regulator proteins, Bcl-2 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR052160	Family	Gypsy Retrotransposon Integrase-like	Interproscan
IPR039871	Family	Protein FAM8A1	Interproscan
IPR010432	Domain	RDD	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR039026	Domain	Protein Kinase B, pleckstrin homology domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR051707	Family	Phosphoinositide-Interacting Signal Transduction Regulators	Interproscan
IPR000225	Repeat	Armadillo	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR013284	Family	Beta-catenin	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR006593	Domain	Cytochrome b561/ferric reductase transmembrane	Interproscan
IPR051237	Family	Ferric-chelate Reductase and Defense	Interproscan
IPR026298	Family	Bcl-2 family	Interproscan
IPR036834	Homologous_superfamily	Bcl-2-like superfamily	Interproscan
IPR046371	Domain	Bcl-2, Bcl-2 homology region 1-3	Interproscan
IPR002475	Family	Bcl2-like	Interproscan
IPR039974	Family	Pre-mRNA-splicing factor SLU7	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47266	ENDONUCLEASE-RELATED	Interproscan
PTHR33395	TRANSCRIPTASE, PUTATIVE-RELATED-RELATED	Interproscan
PTHR13659	AUTOSOMAL HIGHLY CONSERVED PROTEIN	Interproscan
PTHR33332	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR14336	TANDEM PH DOMAIN CONTAINING PROTEIN	Interproscan
PTHR45976	ARMADILLO SEGMENT POLARITY PROTEIN	Interproscan
PTHR45828	CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE	Interproscan
PTHR11256	BCL-2 RELATED	Interproscan
PTHR12942	STEP II SPLICING FACTOR SLU7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003713	Molecular Function	transcription coactivator activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005912	Cellular Component	adherens junction	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0016342	Cellular Component	catenin complex	Interproscan
GO:0019903	Molecular Function	protein phosphatase binding	Interproscan
GO:0035257	Molecular Function	nuclear receptor binding	Interproscan
GO:0045294	Molecular Function	alpha-catenin binding	Interproscan
GO:0045296	Molecular Function	cadherin binding	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0060070	Biological Process	canonical Wnt signaling pathway	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan
GO:0140297	Molecular Function	DNA-binding transcription factor binding	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan
GO:0005741	Cellular Component	mitochondrial outer membrane	Interproscan
GO:0008630	Biological Process	intrinsic apoptotic signaling pathway in response to DNA damage	Interproscan
GO:0042803	Molecular Function	protein homodimerization activity	Interproscan
GO:0046982	Molecular Function	protein heterodimerization activity	Interproscan
GO:0097192	Biological Process	extrinsic apoptotic signaling pathway in absence of ligand	Interproscan
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0005681	Cellular Component	spliceosomal complex	Interproscan
GO:0008380	Biological Process	RNA splicing	Interproscan
GO:0030628	Molecular Function	pre-mRNA 3'-splice site binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02105	CTNNB1; catenin beta 1	-	Cushing syndrome	ko04934	deepkoala