Detailed information of g454.t2 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_028395240.1, DNA polymerase lambda-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5RKI3DNA polymerase lambda OS=Rattus norvegicus OX=10116 GN=Poll PE=2 SV=1
Q9UGP5DNA polymerase lambda OS=Homo sapiens OX=9606 GN=POLL PE=1 SV=1
Q4R380DNA polymerase lambda OS=Macaca fascicularis OX=9541 GN=POLL PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11315Med30Mediator complex subunit 30DomainInterproscan
PF14716HHH_8Helix-hairpin-helix domainDomainInterproscan
PF10391DNA_pol_lambd_fFingers domain of DNA polymerase lambdaDomainInterproscan
PF14792DNA_pol_B_palmDNA polymerase beta palm DomainInterproscan
PF14791DNA_pol_B_thumbDNA polymerase beta thumb FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021019FamilyMediator complex, subunit Med30, metazoaInterproscan
IPR019843Binding_siteDNA polymerase family X, binding siteInterproscan
IPR027421Homologous_superfamilyDNA polymerase lambda lyase domain superfamilyInterproscan
IPR010996DomainDNA polymerase beta-like, N-terminal domainInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR037160Homologous_superfamilyDNA polymerase, thumb domain superfamilyInterproscan
IPR018944DomainDNA polymerase lambda, fingers domainInterproscan
IPR022312FamilyDNA polymerase family XInterproscan
IPR002054DomainDNA-directed DNA polymerase XInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR002008FamilyDNA polymerase family X, beta-likeInterproscan
IPR028207DomainDNA polymerase beta, palm domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR029398DomainDNA polymerase beta, thumb domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0034061Molecular FunctionDNA polymerase activityInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03512POLL; DNA polymerase lambdaEC:2.7.7.7
EC:4.2.99.-
DNA repair and recombination proteinsko03400deepkoala

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